Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcSMS35_0171 |
Symbol | mtnN |
ID | 6145219 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli SMS-3-5 |
Kingdom | Bacteria |
Replicon accession | NC_010498 |
Strand | - |
Start bp | 188650 |
End bp | 189348 |
Gene Length | 699 bp |
Protein Length | 232 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 641615072 |
Product | 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase |
Protein accession | YP_001742288 |
Protein GI | 170681375 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0775] Nucleoside phosphorylase |
TIGRFAM ID | [TIGR01704] 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase [TIGR01705] 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase, putative |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 63 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAATCG GCATCATTGG TGCAATGGAA GAAGAAGTTA CGCTGCTGCG TGACAAAATC GAAAACCGTC AAACTATCAG TCTGGGCGGT TGCGAAATCT ATACCGGCCA ACTGAATGGA ACCGAGGTTG CGCTTCTGAA ATCGGGCATC GGTAAAGTCG CTGCGGCGCT GGGTGCCACT CTGCTGTTGG AACACTGCAA GCCAGATGTG ATTATTAACA CCGGTTCTGC CGGTGGCCTG GCACCAACGC TGAAAGTGGG CGATATCGTT GTCTCGGACG AAGCGCGTTA TCACGACGCG GATGTCACGG CATTTGGTTA TGAATACGGC CAGTTACCAG GCTGCCCGGC AGGCTTTAAA GCTGACGATA AACTGATCGC TGCCGCTGAG GCCTGCATTG CCGAACTGAA TCTTAACGCT GTACGTGGCC TGATTGTTAG CGGCGACGCA TTCATCAACG GTTCTGTTGG TCTGGCGAAA ATCCGCCACA ACTTCCCACA GGCCATTGCT GTAGAGATGG AAGCGACGGC AATCGCCCAT GTCTGCCACA ATTTCAACGT CCCGTTTGTC GTAGTACGCG CCATCTCCGA CGTGGCCGAT CAACAGTCTC ATCTTAGCTT CGATGAGTTC CTGGCTGTTG CCGCTAAACA GTCCAGCCTG ATGGTTGAGT CACTGGTGCA GAAACTGGCA CATGGCTAA
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Protein sequence | MKIGIIGAME EEVTLLRDKI ENRQTISLGG CEIYTGQLNG TEVALLKSGI GKVAAALGAT LLLEHCKPDV IINTGSAGGL APTLKVGDIV VSDEARYHDA DVTAFGYEYG QLPGCPAGFK ADDKLIAAAE ACIAELNLNA VRGLIVSGDA FINGSVGLAK IRHNFPQAIA VEMEATAIAH VCHNFNVPFV VVRAISDVAD QQSHLSFDEF LAVAAKQSSL MVESLVQKLA HG
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