Gene EcSMS35_0171 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_0171 
SymbolmtnN 
ID6145219 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp188650 
End bp189348 
Gene Length699 bp 
Protein Length232 aa 
Translation table11 
GC content53% 
IMG OID641615072 
Product5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase 
Protein accessionYP_001742288 
Protein GI170681375 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0775] Nucleoside phosphorylase 
TIGRFAM ID[TIGR01704] 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase
[TIGR01705] 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase, putative 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones63 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAATCG GCATCATTGG TGCAATGGAA GAAGAAGTTA CGCTGCTGCG TGACAAAATC 
GAAAACCGTC AAACTATCAG TCTGGGCGGT TGCGAAATCT ATACCGGCCA ACTGAATGGA
ACCGAGGTTG CGCTTCTGAA ATCGGGCATC GGTAAAGTCG CTGCGGCGCT GGGTGCCACT
CTGCTGTTGG AACACTGCAA GCCAGATGTG ATTATTAACA CCGGTTCTGC CGGTGGCCTG
GCACCAACGC TGAAAGTGGG CGATATCGTT GTCTCGGACG AAGCGCGTTA TCACGACGCG
GATGTCACGG CATTTGGTTA TGAATACGGC CAGTTACCAG GCTGCCCGGC AGGCTTTAAA
GCTGACGATA AACTGATCGC TGCCGCTGAG GCCTGCATTG CCGAACTGAA TCTTAACGCT
GTACGTGGCC TGATTGTTAG CGGCGACGCA TTCATCAACG GTTCTGTTGG TCTGGCGAAA
ATCCGCCACA ACTTCCCACA GGCCATTGCT GTAGAGATGG AAGCGACGGC AATCGCCCAT
GTCTGCCACA ATTTCAACGT CCCGTTTGTC GTAGTACGCG CCATCTCCGA CGTGGCCGAT
CAACAGTCTC ATCTTAGCTT CGATGAGTTC CTGGCTGTTG CCGCTAAACA GTCCAGCCTG
ATGGTTGAGT CACTGGTGCA GAAACTGGCA CATGGCTAA
 
Protein sequence
MKIGIIGAME EEVTLLRDKI ENRQTISLGG CEIYTGQLNG TEVALLKSGI GKVAAALGAT 
LLLEHCKPDV IINTGSAGGL APTLKVGDIV VSDEARYHDA DVTAFGYEYG QLPGCPAGFK
ADDKLIAAAE ACIAELNLNA VRGLIVSGDA FINGSVGLAK IRHNFPQAIA VEMEATAIAH
VCHNFNVPFV VVRAISDVAD QQSHLSFDEF LAVAAKQSSL MVESLVQKLA HG