Gene EcSMS35_0169 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_0169 
Symbol 
ID6146379 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp187196 
End bp187819 
Gene Length624 bp 
Protein Length207 aa 
Translation table11 
GC content53% 
IMG OID641615070 
Producthypothetical protein 
Protein accessionYP_001742286 
Protein GI170681649 
COG category[S] Function unknown 
COG ID[COG2860] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones60 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCGTCT ATTGGCTGGA TATAGTCGGC ACAGCGGTAT TTGCCATCTC CGGCGTTTTG 
TTAGCCGGAA AATTGCGTAT GGACCCTTTT GGTGTTCTGG TACTGGGCGT GGTAACCGCA
GTAGGCGGCG GAACAATTCG CGACATGGCG CTGGATCACG GCCCGGTATT TTGGGTGAAA
GATCCCACCG ATCTGGTCGT TGCAATGGTC ACCAGCATGC TGACCATCGT GCTGGTGCGC
CAGCCAAGAC GCTTACCAAA ATGGATGTTG CCGGTGCTGG ACGCCGTTGG TCTGGCGGTG
TTTGTCGGCA TTGGCGTGAA TAAAGCCTTT AATGCGGAAG CCGGTCCGTT AATCGCGGTT
TGTATGGGCG TCATTACTGG CGTTGGCGGC GGGATCATTC GTGATGTACT GGCCCGCGAA
ATCCCCATGA TTTTACGTAC AGAAATCTAC GCAACTGCCT GTATTATCGG CGGTATTGTC
CACGCTACGG CTTATTACAC ATTTTCCGTA CCACTGGAAA CAGCCAGTAT GATGGGCATG
GTCGTGACGC TATTGATTCG GCTGGCGGCT ATTCGTTGGC ATCTTAAGCT ACCGACGTTT
GCGCTGGATG AGAATGGTCG TTGA
 
Protein sequence
MLVYWLDIVG TAVFAISGVL LAGKLRMDPF GVLVLGVVTA VGGGTIRDMA LDHGPVFWVK 
DPTDLVVAMV TSMLTIVLVR QPRRLPKWML PVLDAVGLAV FVGIGVNKAF NAEAGPLIAV
CMGVITGVGG GIIRDVLARE IPMILRTEIY ATACIIGGIV HATAYYTFSV PLETASMMGM
VVTLLIRLAA IRWHLKLPTF ALDENGR