Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcSMS35_0165 |
Symbol | fhuB |
ID | 6143524 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli SMS-3-5 |
Kingdom | Bacteria |
Replicon accession | NC_010498 |
Strand | + |
Start bp | 181780 |
End bp | 183762 |
Gene Length | 1983 bp |
Protein Length | 660 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 641615066 |
Product | iron-hydroxamate transporter permease subunit |
Protein accession | YP_001742282 |
Protein GI | 170683245 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0609] ABC-type Fe3+-siderophore transport system, permease component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 59 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGAGTAAAC GAATTGCGCT TTTTCCGGTG TTATTGCTGG TGCTGCTGGT GGTTGCTGCT GCGGCGTTGA CCTGGATGAA CTTCTCGCAG GCGCTGCCGC GCAGCCAGTG GGCGCAGGCC GCCTGGTCGC CGGATATTGA CGTCATCGAG CAGATGATTT TTCACTACAG CTTGTTGCCG CGTCTGGCGA TTTCGCTGCT GGTGGGCGCG GGCCTGGGGC TGGTGGGCGT GCTGTTTCAG CAAGTGCTGC GTAACCCGCT GGCGGAACCG ACGACGTTGG GCGTTGCAAC AGGCGCGCAA CTGGGGATTA CCGTCACCAC GCTCTGGGCG ATCCCAGGTG CTATGGCGAG CCAGTTTGCT GCATTGGCAG GGGCTTGTGT GGTTGGCTTA ATCGTCTTTG GCGTCGCGTG GGGGAAACGG CTTTCGCCGG TAACGCTGAT CCTCGCGGGG CTGGTAGTGA GCCTTTATTG CGGCGCAATC AATCAGTTAC TGGTTATCTT CCATCATGAC CAACTGCAAA GCATGTTCCT GTGGAGCACC GGAACGCTGA CGCAAACCGA CTGGGGCGGC GTTGAGCGTT TATGGCCGCA GCTGCTGGGC GGCGTGATGC TGACGTTATT GCTACTTCGC CCGTTAACTC TGATGGGGCT TGATGATGGA GTGGCGCGCA ATCTCGGGCT GGCCTTGTCG CTGGCGCGTC TGGCGGCGTT GTCGCTGGCG ATTGTCATCA GTGCGCTGCT GGTGAACGCG GTGGGGATTA TCGGCTTTAT CGGTTTGTTC GCGCCACTGC TGGCGAAAAT GCTGGGGGCG CGGCGTCTGC TACCAAGGTT GATGCTGGCG TCGCTGATTG GTGCGCTGAT CCTCTGGCTT TCCGATCAAA TCATCCTCTG GCTGACTCGC GTGTGGATGG AAGTGTCCAC CGGTTCGGTC ACTGCGTTGA TCGGTGCGCC GCTGCTACTG TGGTTGCTGC CGCGTTTACG CAGCATTAGC GCGCCGGATA TGAAGGTCAA CGATCGTGTC GAGACTGAAC GCCAACACGT GCTGGCGTTT GCCCTCGCGG GCGGCGTGCT GCTGTTGATG GCTGTGGTGG TGGCGCTGTC GTTTGGTCGT GATGCGCACG GCTGGACGTG GGCGAGCGGG GCGCTGCTCG ATGATTTAAT GCCCTGGCGC TGGCCGCGAA TTATGGCGGC ACTGTTTGCG GGCATCATGC TGGCAGTGGC GGGCTGTATT ATTCAGCGGC TGACCGGAAA CCCGATGGCA AGCCCGGAAG TGCTGGGGAT TAGTTCCGGC GCGGCGTTTG GTGTGGTGTT GATGCTGTTT TTGGTGCCGG GTAATGCCTT TGGCTGGCTG TTACCCGCGG GCAGCCTCGG GGCGGCGGTG ACGCTGTTGA TCATTATGAT CGCCGCCGGA CGCGGTGGAT TTTCCCCACA CCGCATGTTA CTGGCGGGGA TGGCGTTAAG TACCGCGTTC ACCATGCTTT TGATGATGTT GCAGGCAAGT GGTGACCCGC GAATGGCGCA AGTTCTGACC TGGATTTCCG GTTCGACCTA CAACGCGACC GAGGCGCAGG TCTGGCGCAC GGGAATTGTG ATGGTAATTT TGCTGGCGAT TACCCCGCTG TGCCGCCGCT GGCTGACCAT TTTACCGCTG GGCGGTGATA CCGCACGAGC CGTAGGAATG GCGCTGACGC CGACGCGAAT TGCGCTGCTG CTGTTAGCGG CTTGCCTGAC AGCGACTGCG ACAATGACCA TTGGACCGTT GAGTTTTGTT GGTTTAATGG CACCGCATAT TGCGCGGATG ATGGGCTTTC GACGGACGAT GCCACACATC GTAATTTCGG CGCTGGTGGG TGGTTTACTG CTGGTGTTCG CTGACTGGTG TGGGCGGATG GTATTGTTTC CATTCCAGAT CCCGGCGGGG CTGCTGTCGA CCTTTATCGG CGCGCCATAT TTTATCTATT TGTTGAGAAA GCAGAGCCGT TAA
|
Protein sequence | MSKRIALFPV LLLVLLVVAA AALTWMNFSQ ALPRSQWAQA AWSPDIDVIE QMIFHYSLLP RLAISLLVGA GLGLVGVLFQ QVLRNPLAEP TTLGVATGAQ LGITVTTLWA IPGAMASQFA ALAGACVVGL IVFGVAWGKR LSPVTLILAG LVVSLYCGAI NQLLVIFHHD QLQSMFLWST GTLTQTDWGG VERLWPQLLG GVMLTLLLLR PLTLMGLDDG VARNLGLALS LARLAALSLA IVISALLVNA VGIIGFIGLF APLLAKMLGA RRLLPRLMLA SLIGALILWL SDQIILWLTR VWMEVSTGSV TALIGAPLLL WLLPRLRSIS APDMKVNDRV ETERQHVLAF ALAGGVLLLM AVVVALSFGR DAHGWTWASG ALLDDLMPWR WPRIMAALFA GIMLAVAGCI IQRLTGNPMA SPEVLGISSG AAFGVVLMLF LVPGNAFGWL LPAGSLGAAV TLLIIMIAAG RGGFSPHRML LAGMALSTAF TMLLMMLQAS GDPRMAQVLT WISGSTYNAT EAQVWRTGIV MVILLAITPL CRRWLTILPL GGDTARAVGM ALTPTRIALL LLAACLTATA TMTIGPLSFV GLMAPHIARM MGFRRTMPHI VISALVGGLL LVFADWCGRM VLFPFQIPAG LLSTFIGAPY FIYLLRKQSR
|
| |