Gene EcSMS35_0164 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_0164 
SymbolfhuD 
ID6146555 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp180893 
End bp181783 
Gene Length891 bp 
Protein Length296 aa 
Translation table11 
GC content54% 
IMG OID641615065 
Productiron-hydroxamate transporter substrate-binding subunit 
Protein accessionYP_001742281 
Protein GI170684223 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0614] ABC-type Fe3+-hydroxamate transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones59 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGGCT TACCTCTTAT TTCGCGCCGT CGACTGTTAA CGGCGATGGC GCTTTCTCCG 
TTGTTATGGC AGATGAATAC CGCCCACGCG GCGGCTATTG ATCCCAATCG TATTGTGGCG
CTGGAGTGGT TGCCGGTGGA ATTACTGCTG GCGCTCGGCA TCGTGCCTTA CGGCGTGGCG
GATACCATCA ACTATCGCCT GTGGGTCAGC GAACCACCAT TGCCGGACTC AGTGATCGAC
GTCGGTTTGC GCACAGAACC TAACCTTGAA CTGCTGACCG AAATGAAACC ATCGTTTATG
GTCTGGTCGG CAGGATATGG CCCTTCACCA GAAATGCTGG CACGCATTGC GCCGGGGCGC
GGATTTAACT TCAGCGATGG CAAACAGCCG CTGGCGATGG CGCGTAAATC ACTGACGGAA
ATGGCAGATT TACTTAACCT GCAAAGCGCA GCAGAAACGC ATTTAGCGCA CTATGAAGAC
TTTATCCGCA GCATGAAACC CCGCTTTGTG AAGCGTGGTG CACGCCCGTT ATTGCTGACG
ACACTTATCG ATCCGCGCCA TATGTTGGTC TTCGGTCCAA ACAGCCTGTT CCAGGAAATT
CTTGATGAGT ACGGCATCCC AAATGCCTGG CAAGGGGAAA CCAACTTCTG GGGCAGTACC
GCTGTCAGTA TCGATCGTCT GGCAGCGTAT AAAGACGTTG ATGTGCTCTG TTTTGATCAC
GACAACAGCA AAGACATGGA CACCCTAATG GCAACCCCGC TGTGGCAGGC CATGCCGTTT
GTCCGCGCCG GACGCTTTCA GCGCGTTCCG GCGGTCTGGT TCTATGGTGC GACGCTTTCT
GCAATGCACT TTGTGCGTAT TCTGGATAAC GCCATCGGAG GTAAAGCGTG A
 
Protein sequence
MSGLPLISRR RLLTAMALSP LLWQMNTAHA AAIDPNRIVA LEWLPVELLL ALGIVPYGVA 
DTINYRLWVS EPPLPDSVID VGLRTEPNLE LLTEMKPSFM VWSAGYGPSP EMLARIAPGR
GFNFSDGKQP LAMARKSLTE MADLLNLQSA AETHLAHYED FIRSMKPRFV KRGARPLLLT
TLIDPRHMLV FGPNSLFQEI LDEYGIPNAW QGETNFWGST AVSIDRLAAY KDVDVLCFDH
DNSKDMDTLM ATPLWQAMPF VRAGRFQRVP AVWFYGATLS AMHFVRILDN AIGGKA