| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_0159 |
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| Symbol | hrpB |
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| ID | 6143552 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | + |
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| Start bp | 172465 |
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| End bp | 174939 |
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| Gene Length | 2475 bp |
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| Protein Length | 824 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 641615060 |
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| Product | ATP-dependent RNA helicase HrpB |
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| Protein accession | YP_001742276 |
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| Protein GI | 170681199 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1643] HrpA-like helicases |
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| TIGRFAM ID | [TIGR01970] ATP-dependent helicase HrpB |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.805468 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 55 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTACAAT GTGGCGCGAA GAATGTTAAC CCTCTGGAGC GTTTTGTGTC GTCGTTGCCC
GTTGCTGCCG TCTTACCTGA GTTACTTGCT GCCCTCGATG GTGCATCGCA GGTGTTATTA
AGTGCGCCGA CCGGGGCCGG GAAATCAACC TGGCTGCCGC TGCAACTGCT GGCGCATCCA
GGCATTAACG GGAAAGTTAT CCTGCTGGAG CCGCGTCGTC TGGCGGCGCG TAACGTTGCG
CAACGGCTGG CGGAGCTGCT TAACGAAAAG CCAGGCGATA CCGTTGGCTA CCGGATGCGT
GCGCAAAACT GCGTCGGGCC GAATACCCGC CTGGAAGTGG TTACCGAAGG CGTGCTGACG
CGCATGATCC AGCGTGACCC GGAACTGAGC GGTGTTGGAT TGGTGATCCT CGATGAGTTT
CATGAGCGCA GTTTGCAGGC GGATTTGGCG TTGGCGCTGT TACTCGATGT GCAACAAGGT
CTGCGTGATG ACCTTAAACT GCTGATTATG TCGGCTACGC TGGACAACGA CCGCTTGCAG
CAAATGCTGC CAGAAGCGCC CGTCATCATC TCAGAAGGGC GCTCGTTTCC GGTTGAACGC
CGTTATTTAC CACTGCCCGC GCATCAGCGT TTTGACGAAG CCGTTGCGGT AGCCACCGCC
GAAATGCTGC GTCAGGAAAG CGGATCATTA CTGTTATTTT TACCTGGCGT CGGAGAAATT
CAGCGTGTGC AGGAACAACT GGCTTCGCGC ATCGGCAGTG ATGTGTTGCT CTGCCCGCTG
TATGGCGCGT TGTCGCTGAA CGATCAGCGA AAAGCGATCC TCCCGGCACC GCAAGGGATG
CGCAAAGTGG TGCTGGCGAC CAATATTGCT GAAACCAGTT TAACCATCGA AGGTATTCGT
CTGGTGGTGG ATTGTGCTCA GGAACGTGTG GCGCGTTTTG ATCCGCGTAC AGGGCTTACG
CGGCTGGTTA CTCAACGCGT TAGTCAGGCG TCGATGACGC AGCGTGCCGG GCGTGCCGGG
CGTCTGGATC CGGGTATCTG CCTGCATTTA ATCGCCAAAG AACAAGCAGA ACGCGCCGCG
GCGCAAAGTG AACCGGAAAT ATTACAAAGC GATCTTTCCT GTTTGCTGAT GGAATTACTG
CAATGGGGAT GCAGCGATCC GGCGCAGATG AGCTGGCTGG ATCAACCGCC AACGGTGAAT
CTACTGGCCG CGAAACGCCT GTTACGGATG CTGGGGGCGC TGGACGGTGA ACGGCTTAGT
GCGCAAGGGC AAAAAATGGC AGCGCTGGGG AACGATCCGC GTTTAGCGGC AATGCTGGTG
AGCGCGAAGA GCGACGACGA AGCTGCTACC GCGGCAAAAA TTGCCGCCAT TCTCGAAGAG
CCGCCACGGA TGGGCAATAG TGACCTGGGC GTGGCGTTTT CGCGCAATCA ACCCGCCTGG
CAGCAACGTA GTCAGCAACT GTTAAAACGC TTAAACGTAC GCGGCGGTGA GGCAGACAGT
TCGCTTATCG CGCCGCTACT TGCCAGAGCG TATGCCGATC GCATTGCTCG TCGCCGTGGG
CAAGATGAAC GCTATCAACT GGCGAACGGC ATGGGGGCGA TGCTCGATGC CGACGATGCG
CTAAGCCGCC ACGAATGGTT GATCGCACCG TTATTATTGC AGGGCAGCGC CTCGCCGGAT
GCGCGGATTT TACTGGCGCT ACCGGTCGAT ATTGATGAGT TAGTACAACG CTGCCCGCAG
CTGGTACAGC AATCGGACAC CGTGGAGTGG GATGACGCGC AAGGTACGCT GAAAGCCTGG
CGTCGGCTGC AAATCGGTCA GTTGATGGTG AAAGTGCAGC CACTGGCGAA ACCCTCGGAA
GACGAGTTGC ATCAGGCGAT GCTTAACGGC ATTCGTGATA AAGGTTTAAG CGTGCTCAAC
TGGACGGCGG AAGCGGAACA GCTACGCTTG CGTTTGTTAT GCGCCGCAAA GTGGTTGCCG
GAATATGACT GGCCAGCGGT TGATGATGAG AGTTTGTTGG CGACGCTGGA AACGTGGCTA
CTGCCGCATA TGACAGGCGT ACATTCGCTA CGCGGCTTGA AATCACTCGA TATTTATCAG
GCACTGCGTG GATTACTTGA TTGGGTAATG CAGCAACGTC TGGATAGTGA ATTGCCTGCG
CATTACACTG TGCCGACGGG AAGCCGGATC GCCATTCGTT ATCATGAAGA TAACCCGCCC
GCGCTGGCGG TGAGAATGCA GGAGATGTTT GGCGCGGCCA CCAATCCGAC GATCGCCCAG
GGGCGCGTGC CGCTGGTGCT GGAGTTACTT TCCCCTGCCC AAAGGCCGCT GCAAATCACG
CGTGATTTGA GCGCCTTCTG GAAAGGAGCG TACCGTGAGG TGCAAAAAGA GATGAAAGGG
CGTTATCCCA AACATGTCTG GCCGGACGAC CCGGCAAACA CCGCACCAAC GCGACGAACG
AAAAAGTATT CGTGA
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| Protein sequence | MLQCGAKNVN PLERFVSSLP VAAVLPELLA ALDGASQVLL SAPTGAGKST WLPLQLLAHP
GINGKVILLE PRRLAARNVA QRLAELLNEK PGDTVGYRMR AQNCVGPNTR LEVVTEGVLT
RMIQRDPELS GVGLVILDEF HERSLQADLA LALLLDVQQG LRDDLKLLIM SATLDNDRLQ
QMLPEAPVII SEGRSFPVER RYLPLPAHQR FDEAVAVATA EMLRQESGSL LLFLPGVGEI
QRVQEQLASR IGSDVLLCPL YGALSLNDQR KAILPAPQGM RKVVLATNIA ETSLTIEGIR
LVVDCAQERV ARFDPRTGLT RLVTQRVSQA SMTQRAGRAG RLDPGICLHL IAKEQAERAA
AQSEPEILQS DLSCLLMELL QWGCSDPAQM SWLDQPPTVN LLAAKRLLRM LGALDGERLS
AQGQKMAALG NDPRLAAMLV SAKSDDEAAT AAKIAAILEE PPRMGNSDLG VAFSRNQPAW
QQRSQQLLKR LNVRGGEADS SLIAPLLARA YADRIARRRG QDERYQLANG MGAMLDADDA
LSRHEWLIAP LLLQGSASPD ARILLALPVD IDELVQRCPQ LVQQSDTVEW DDAQGTLKAW
RRLQIGQLMV KVQPLAKPSE DELHQAMLNG IRDKGLSVLN WTAEAEQLRL RLLCAAKWLP
EYDWPAVDDE SLLATLETWL LPHMTGVHSL RGLKSLDIYQ ALRGLLDWVM QQRLDSELPA
HYTVPTGSRI AIRYHEDNPP ALAVRMQEMF GAATNPTIAQ GRVPLVLELL SPAQRPLQIT
RDLSAFWKGA YREVQKEMKG RYPKHVWPDD PANTAPTRRT KKYS
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