| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_0150 |
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| Symbol | htrE |
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| ID | 6143082 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | - |
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| Start bp | 163230 |
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| End bp | 165830 |
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| Gene Length | 2601 bp |
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| Protein Length | 866 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 641615051 |
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| Product | putative outer membrane usher protein |
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| Protein accession | YP_001742267 |
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| Protein GI | 170679612 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3188] P pilus assembly protein, porin PapC |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0557898 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 59 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTCCCGAA AAATCATAAA AACGCATAAT AACAAACTTA CATATATAGC CTCGTTTTGC
GCATTGCTAT TAAGCCCCTG TGCCATAAGC GCTGAACACG TTGAATATGA TAATACCTTT
TTGATGGGGC AAGATGCTTT TAACATCGAC CTTAGTCGGT ATACCGAAGG TAACCCTACC
TTGCCCGGCG TGTATGACGT CAGTGTTTAT ATCAATGATC AACCGGTTAT CAACCAAAGC
ATTTCCTTTA TTACCCTCGA AGGTAAGAAG AATGCGCAGG CTTGTATCAC CCTGAAGAAT
TTATTGCAGT TTCACATTAA TAAACCAGAT ATAAATGCCG AGAATTCCAT CCTTCTACAG
CGCGAAGGCG AACTCGGAGA TTGTCTTGAT TTAGCAAATA TCATTCCTCA GGCCTCGGTT
CATTATGACG TCAACGATCA ACGACTGGAC ATCAATGTTC CTCAAGCCTG GGTAATGAAG
AATTACCAAA ACTATGTTGA CTCTTCACTG TGGGAAAACG GTATTAACGC CGCAATGCTA
GCCTACAACG TCAACGCATA TCACAGCGAA ATTCCGGACA GAAAAAACGA CAGTGTTTAC
GCCGCATTTA ACGGCGGTAT AAATCTGGGG GCATGGCGAC TTCGCGCAAC CGGCAACTAC
AACTGGATGA CCAATGTAGG CAGTGATTAC GATTTTCAGA ATCGCTATTT GCAGCGCGAC
CTGGCCTCTT TGCGTTCACA GTTAATAGTG GGTGAGTCAT ACACAACTGG GGAAACCTTT
GATGCTGTCA GTATTCGCGG TATTCGTTTA TACAGCGACA GCCGAATGCT ACCGCCTGCG
TTAGCTAGTT TTGCGCCTAT TATTCATGGT GTCGCTAACA CCAACGCAAA AGTCACCATT
ACCCAGGGCG GGTATAAAAT ATATGAAACT ACTGTACCGC CGGGAGCATT TGTTATTGAT
GATTTAAGCC CATCAGGCTA CGGCAGCGAT CTCATTATCA CAATCGAAGA ATCTGATGGC
ATAAAACGAA CTTTTTCCCA GCCATTTTCT TCGGTAATTC AGATGCAACG CCCTGGTGTT
GGAAGATGGG ACATCAGTGC TGGTCAGGTA TTAAAAGACG ATATTCAAAA TGAGCCAAAT
TTGTTCCAGG CCAGCTACTA CTATGGTCTG AACAACTATC TTACAGGTTA TACCGGTATT
CAAATTACCG ATAATAACTA TACTGCCGGG CTGTTGGGCC TTGGCCTGAA TACCGCGTAC
GGTGCGTTTT CAGTCGATGT AACCCACTCG GATGTGCAAA TTCCGGACGA TAAAACCTAC
CGCGGGCAAA GTTATCGCAT CTCCTGGAAT AAGTTATTTG AAGATACCAG AACCTCGCTC
AATATCGCCG CTTACCGTTA TTCAACCCAG AATTATCTGG GGCTTAACGA TGCACTGACA
TTGATCGATG AAGTAAAACA TCCGGAACAG GACCTGGAAC CTAAAAATAT GCGTAACTAT
TCACGCATGA AAAATCAGGT TACGGTTAGT ATTAACCAAC CCCTCAAGTT TGAAAAGAAA
GACTATGGCT CATTCTATCT TGCCGGAAGT TGGTCTGACT ATTGGGCGGA CGGACAAAAT
AATACTAACT ACTCCATTGG TTATAGTAAC AGCGCATCGT GGGGAAGCTA CAGCATTAGT
GCCCAACGGT CCTGGAGCCA GGACGGCGGT AATGAAGACA GCATCTATCT AAGCTTTAGC
ATTCCTATCG AAAAGTTACT GGGTTCAGAA CATCGCGACT CTGGTTTTCA GAGCATTGAT
ACTCAGTTAA ATAGTGATTT CAACGGCAGC AATCAACTCA GTATCAGCAG TAGTGGTTAT
AGCACCGAAA ACCATATCAG TTATAGCGTC AATACAGGCT ATTCGATGAT GAAATCCAGT
GATGATTTGG GCTATATCGG CGGATATGCA AGCTATGAAT CTCCCTGGGG AACTCTTTCC
AGTTCAGTTT CCGCAAGCAG TGATAATAGC CGTCAAATCT CATTTAATAC CGACGGCGGA
TTTGTTTTAC ATAGCGGCGG CCTGACCTTC AGTAATGACA GCTTTAGCGA CTCAGACACT
CTGGCCGTTG TACAAGCGCC AGGAGCTAAA GGGGCGCGTA TTAACTATGG TAATAGTACG
ATAGATCGTT GGGGATATGG TGTTACTAAC GCGCTCTCCC CTTATCATGA AAACCGAATT
GCACTCGATA TTAACGGTCT GGAAAATGAC GTTGAATTGA AAAGTACCAG TGCTATTACT
GTCCCCCGCC AAGGGTCTGT TGTCTTTGCT GGTTTTGAAA CAGTTCAGGG ACAATCAGCG
ATTATGAACA TCAAGCGAAC TGACGGTAAA AACATTCCGT TTGCCGCAGA TATTTATGAC
GAGAACGGAA ATATTATTGG CAATGTAGGG CAAGGTGGTC AGGCCTTTGT TCGAGGTATA
GAACAACAAG GTAACATACG TATCAACTGG CTTGACGACG GTAAACCTGT CACTTGCCTT
GCTCATTACC AGCAGAGCGC AGCACCAGAA AAAATAGCGC AAACTATTAT TCTGAATGGA
ATTAGTTGTC AGATTCAGTA A
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| Protein sequence | MSRKIIKTHN NKLTYIASFC ALLLSPCAIS AEHVEYDNTF LMGQDAFNID LSRYTEGNPT
LPGVYDVSVY INDQPVINQS ISFITLEGKK NAQACITLKN LLQFHINKPD INAENSILLQ
REGELGDCLD LANIIPQASV HYDVNDQRLD INVPQAWVMK NYQNYVDSSL WENGINAAML
AYNVNAYHSE IPDRKNDSVY AAFNGGINLG AWRLRATGNY NWMTNVGSDY DFQNRYLQRD
LASLRSQLIV GESYTTGETF DAVSIRGIRL YSDSRMLPPA LASFAPIIHG VANTNAKVTI
TQGGYKIYET TVPPGAFVID DLSPSGYGSD LIITIEESDG IKRTFSQPFS SVIQMQRPGV
GRWDISAGQV LKDDIQNEPN LFQASYYYGL NNYLTGYTGI QITDNNYTAG LLGLGLNTAY
GAFSVDVTHS DVQIPDDKTY RGQSYRISWN KLFEDTRTSL NIAAYRYSTQ NYLGLNDALT
LIDEVKHPEQ DLEPKNMRNY SRMKNQVTVS INQPLKFEKK DYGSFYLAGS WSDYWADGQN
NTNYSIGYSN SASWGSYSIS AQRSWSQDGG NEDSIYLSFS IPIEKLLGSE HRDSGFQSID
TQLNSDFNGS NQLSISSSGY STENHISYSV NTGYSMMKSS DDLGYIGGYA SYESPWGTLS
SSVSASSDNS RQISFNTDGG FVLHSGGLTF SNDSFSDSDT LAVVQAPGAK GARINYGNST
IDRWGYGVTN ALSPYHENRI ALDINGLEND VELKSTSAIT VPRQGSVVFA GFETVQGQSA
IMNIKRTDGK NIPFAADIYD ENGNIIGNVG QGGQAFVRGI EQQGNIRINW LDDGKPVTCL
AHYQQSAAPE KIAQTIILNG ISCQIQ
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