| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_0144 |
|---|
| Symbol | panC |
|---|
| ID | 6145965 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli SMS-3-5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010498 |
|---|
| Strand | - |
|---|
| Start bp | 158307 |
|---|
| End bp | 159158 |
|---|
| Gene Length | 852 bp |
|---|
| Protein Length | 283 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 641615045 |
|---|
| Product | pantoate--beta-alanine ligase |
|---|
| Protein accession | YP_001742261 |
|---|
| Protein GI | 170679778 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0414] Panthothenate synthetase |
|---|
| TIGRFAM ID | [TIGR00018] pantoate--beta-alanine ligase
[TIGR00125] cytidyltransferase-related domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 57 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGTTAATTA TCGAAACCCT GCCGCTGCTG CGTCAGCAAA TCCGCCGCCT GCGTATGGAA
GGTAAGCGCG TGGCGCTGGT GCCCACCATG GGTAACCTGC ACGACGGCCA TATGAAGCTG
GTTGACGAAG CCAAAGCCCG CGCCGATGTG GTCGTCGTCA GTATTTTCGT TAACCCGATG
CAGTTTGACC GCCCGGAAGA TCTGGCTCGC TACCCACGCA CCTTGCAGGA AGACTGCGAG
AAGCTAAACA AACGTAAAGT GGATCTGGTT TTCGCTCCCT CGGTAAAAGA GATCTATCCG
AACGGTACAG AAACCCACAC CTATGTCGAT GTTCCAGGCC TTTCCACCAT GCTGGAAGGT
GCCAGCCGTC CAGGACATTT TCGCGGCGTT TCGACTATTG TCAGCAAGCT TTTCAACCTG
GTCCAGCCAG ATATCGCTTG CTTCGGTGAA AAAGATTTTC AGCAACTGGC GCTGATCCGC
AAAATGGTTG CTGATATGGG CTTTGATATT GAGATTGTCG GCGTACCGAT TATGCGCGCC
AAAGACGGTC TGGCGCTGAG TTCCCGTAAC GGTTATCTGA CGGCGGAACA ACGCAAAATT
GCGCCGGGTC TGTACAAGGT CTTAAGTTCA ATTGCCGACA AATTGCAGGC TGGCGAACGG
GATCTCGATG AAATTATTGC TATTGCCGGG CAAGAACTGA ATGAAAAAGG TTTCCGTTCC
GATGATATTC AGATTCGCGA TGCCGACACC TTGCTGGAAA TCTCTGAAAA CAGCAAACGA
GCGGTGATCC TGGTAGCCGC CTGGCTTGGC GATGCTCGCC TGATCGACAA CAAAATCGTA
GAACTGGCGT AA
|
|---|
| Protein sequence | MLIIETLPLL RQQIRRLRME GKRVALVPTM GNLHDGHMKL VDEAKARADV VVVSIFVNPM
QFDRPEDLAR YPRTLQEDCE KLNKRKVDLV FAPSVKEIYP NGTETHTYVD VPGLSTMLEG
ASRPGHFRGV STIVSKLFNL VQPDIACFGE KDFQQLALIR KMVADMGFDI EIVGVPIMRA
KDGLALSSRN GYLTAEQRKI APGLYKVLSS IADKLQAGER DLDEIIAIAG QELNEKGFRS
DDIQIRDADT LLEISENSKR AVILVAAWLG DARLIDNKIV ELA
|
|---|
| |