| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_0140 |
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| Symbol | |
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| ID | 6146996 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | + |
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| Start bp | 155134 |
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| End bp | 156363 |
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| Gene Length | 1230 bp |
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| Protein Length | 409 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 641615041 |
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| Product | polysaccharide deacetylase domain-containing protein |
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| Protein accession | YP_001742257 |
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| Protein GI | 170680801 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0726] Predicted xylanase/chitin deacetylase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 57 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTACAAAC AAGCTGTTAT TCTCCTGCTG ATGCTGTTTA CCGCAAGCGT CAGTGCCGCA
TTACCTGCCC GTTATATGCA AACCATCGAA AATGCCGCGG TCTGGGCGCA AATTGGCGAC
AAAATGGTGA CGGTAGGGAA TATTCGGGCC GGGCAAATCA TTGCCGTGGA GCCCACTGCC
GCAAGTTATT ACGCATTTAA TTTTGGCTTT GGTAAAGGGT TTATCGATAA AGGCCATCTC
GAGCCGGTTC AGGGGCGACA AAAAGTTGAA GATGGTTTGG GTGACCTCAA CAAGCCGCTG
AGTAATCAGA ACTTAATAAC CTGGAAAGAT ACACTGGTTT ATAACGCACC GAGTGTGGGC
AGTGCGCCAT TTGGAGTACT GGCGGACAAT TTGCGCTACC CGATTTTGCA TAAACTGAAA
GACAGGTTAA ATCAAACCTG GTATCAGATC CGTATTGGCG ATCGACTGGC CTATATCAGC
GCGCTGGATG CCCAACCCGA TAATGGCCTG CCGGTGCTAA CCTATCACCA TATTTTGCGC
GACGAAGAAA ACACCCGTTT TCGCCATACT TCGACGACCA CCTCGGTACG CGCTTTCAAT
AACCAGATGG CCTGGCTGCG CGACAGGGGA TACGCGACAC TGAGCATGGC GCAGTTGGAA
GGTTACGTGA AGAATAAGAT CAATCTCCCT GCGCGAGCGG TGGTAATTAC CTTTGATGAT
GGCCTCAAGT CGGTGAGCCG CTATGCGTAT CCTGTGTTGA AACAATATGG TATGAAGGCG
ACGGCGTTTA TTGTTACCTC GCGCATCAAA CGTCACCCGC AGAAATGGAA CCCAAAATCG
CTGCAATTTA TGAGCGTTTC TGAACTTAAC GAAATTCGCG ATGTATTTGA TTTCCAGTCA
CATACTCATT TTTTGCATCG GATAGATGGT TATCGGCGGC CTATATTGCT GAGCCGTAGT
GAGCACAATA TTCTGTTTGA TTTTGCACGT TCACGCCGCG CTCTGGCGCA ATTTAATCCA
CATGTTTTGT ATCTTTCTTA TCCATTTGGC GGATTTAATG ACAAAGCCGT GAAGGCAGCA
AAAGAAGCCG GATTTCACCT GGCGGTGACG ACCATGAAAG GCAAAGTAAA ACCGGGGGAT
AATCCGTTGT TACTAAAACG ACTTTATATC TTAAGAACGG ATTCGCTGGA GACGATGTCG
CGGCTGGTGA GTAACCAGCC GCAGGGATAA
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| Protein sequence | MYKQAVILLL MLFTASVSAA LPARYMQTIE NAAVWAQIGD KMVTVGNIRA GQIIAVEPTA
ASYYAFNFGF GKGFIDKGHL EPVQGRQKVE DGLGDLNKPL SNQNLITWKD TLVYNAPSVG
SAPFGVLADN LRYPILHKLK DRLNQTWYQI RIGDRLAYIS ALDAQPDNGL PVLTYHHILR
DEENTRFRHT STTTSVRAFN NQMAWLRDRG YATLSMAQLE GYVKNKINLP ARAVVITFDD
GLKSVSRYAY PVLKQYGMKA TAFIVTSRIK RHPQKWNPKS LQFMSVSELN EIRDVFDFQS
HTHFLHRIDG YRRPILLSRS EHNILFDFAR SRRALAQFNP HVLYLSYPFG GFNDKAVKAA
KEAGFHLAVT TMKGKVKPGD NPLLLKRLYI LRTDSLETMS RLVSNQPQG
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