Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcSMS35_0126 |
Symbol | lpdA |
ID | 6144414 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli SMS-3-5 |
Kingdom | Bacteria |
Replicon accession | NC_010498 |
Strand | + |
Start bp | 138154 |
End bp | 139641 |
Gene Length | 1488 bp |
Protein Length | 495 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 641615027 |
Product | dihydrolipoamide dehydrogenase |
Protein accession | YP_001742243 |
Protein GI | 170679767 |
COG category | [C] Energy production and conversion |
COG ID | [COG1249] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes |
TIGRFAM ID | [TIGR01350] dihydrolipoamide dehydrogenase |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 51 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGATAATG GGCGTCATAA AAAAAACGTC AGACCCGCCG GAGATAAATA TATAGAGGTC ATGATGAGTA CTGAAATCAA AACTCAGGTC GTGGTACTTG GGGCAGGCCC CGCAGGTTAC TCCGCTGCCT TCCGTTGCGC TGATTTAGGT CTGGAAACCG TAATCGTAGA ACGTTACAAC ACCCTTGGCG GTGTTTGCCT GAACGTCGGC TGTATCCCTT CTAAAGCACT GCTGCACGTA GCAAAAGTTA TCGAAGAAGC CAAAGCGCTG GCTGAACACG GTATCGTCTT CGGCGAACCG AAAACCGATA TCGACAAGAT TCGTACCTGG AAAGAGAAAG TGATCAATCA GCTGACCGGT GGTCTGGCTG GTATGGCGAA AGGCCGCAAA GTCAAAGTGG TCAACGGTCT GGGTAAATTT ACCGGGGCTA ACACCCTGGA AGTTGAAGGT GAGAACGGCA AAACCGTGAT CAACTTCGAC AACGCGATCA TTGCAGCGGG TTCTCGCCCG ATCCAACTGC CGTTTATTCC GCATGAAGAT CCGCGTATCT GGGACTCCAC TGACGCGCTG GAACTGAAAG AAGTACCAGA ACGCCTGCTG GTAATGGGTG GCGGTATCAT CGGTCTGGAA ATGGGCACCG TATACCACGC GCTGGGTTCA CAGATTGACG TGGTTGAAAT GTTCGACCAG GTCATCCCGG CAGCTGATAA AGACATCGTT AAAGTCTTCA CCAAGCGTAT CAGCAAGAAA TTCAACCTGA TGCTGGAAAC CAAAGTTACC GCCGTTGAAG CGAAAGAAGA CGGTATTTAT GTGACGATGG AAGGCAAAAA AGCACCCGCT GAACCGCAGC GTTACGACGC CGTGCTGGTA GCGATTGGTC GTGTGCCGAA CGGTAAAAAC CTCGACGCAG GCAAAGCTGG CGTGGAAGTG GACGACCGTG GTTTCATCCG CGTTGACAAA CAGCTGCGTA CCAACGTACC GCACATCTTT GCTATCGGCG ATATCGTCGG TCAGCCGATG CTGGCACACA AAGGTGTTCA CGAAGGTCAT GTTGCCGCTG AAGTTATTGC CGGTAAGAAA CACTACTTCG ATCCGAAAGT TATCCCGTCT ATCGCCTATA CCGAACCAGA AGTTGCATGG GTGGGTCTGA CTGAGAAAGA AGCGAAAGAG AAAGGCATCA GCTACGAAAC CGCCACCTTC CCGTGGGCTG CTTCTGGTCG AGCTATCGCT TCTGACTGCG CAGATGGTAT GACCAAGCTG ATTTTCGACA AAGAATCTCA CCGTGTGATC GGTGGTGCGA TTGTCGGTAC TAACGGCGGC GAGCTGCTGG GTGAAATCGG TCTGGCAATC GAAATGGGTT GTGATGCTGA AGACATCGCA CTGACCATCC ACGCGCACCC GACTCTGCAC GAGTCTGTGG GCCTGGCGGC AGAAGTGTTC GAAGGTAGCA TTACCGACCT GCCGAACCCG AAAGCGAAGA AGAAGTAA
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Protein sequence | MDNGRHKKNV RPAGDKYIEV MMSTEIKTQV VVLGAGPAGY SAAFRCADLG LETVIVERYN TLGGVCLNVG CIPSKALLHV AKVIEEAKAL AEHGIVFGEP KTDIDKIRTW KEKVINQLTG GLAGMAKGRK VKVVNGLGKF TGANTLEVEG ENGKTVINFD NAIIAAGSRP IQLPFIPHED PRIWDSTDAL ELKEVPERLL VMGGGIIGLE MGTVYHALGS QIDVVEMFDQ VIPAADKDIV KVFTKRISKK FNLMLETKVT AVEAKEDGIY VTMEGKKAPA EPQRYDAVLV AIGRVPNGKN LDAGKAGVEV DDRGFIRVDK QLRTNVPHIF AIGDIVGQPM LAHKGVHEGH VAAEVIAGKK HYFDPKVIPS IAYTEPEVAW VGLTEKEAKE KGISYETATF PWAASGRAIA SDCADGMTKL IFDKESHRVI GGAIVGTNGG ELLGEIGLAI EMGCDAEDIA LTIHAHPTLH ESVGLAAEVF EGSITDLPNP KAKKK
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