| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_0114 |
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| Symbol | ampE |
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| ID | 6143145 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | + |
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| Start bp | 125797 |
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| End bp | 126651 |
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| Gene Length | 855 bp |
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| Protein Length | 284 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 641615015 |
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| Product | regulatory protein AmpE |
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| Protein accession | YP_001742231 |
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| Protein GI | 170680046 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG3725] Membrane protein required for beta-lactamase induction |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 0.363052 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGCTAT TTACAACCTT ACTGGTGTTA ATTTTCGAGC GCCTGTTTAA GTTGGGCGAG
CACTGGCAGC TTGATCATCG TCTTGAAGCG TTCTTTCGGC GGGTGAAACA TTTTTCTCTC
GGGCGCACAT TAGGCATGAC CATTATTGCG ATGGGCGTGA CTTTTTTACT GTTACGCACA
TTGCAGGGAG TATTATTCAA CGTTCCCACG CTGCTGGTGT GGCTGCTGAT TGGTTTGCTG
TGTATTGGCG CAGGTAAAGT TCGTCTTCAT TATCATGCTT ATCTGACAGC TGCTTCACGT
AATGATAGCC ATGCCCGTGC CACGATGGCT GGCGAACTCA CCATGATTCA CGGCGTCCCG
GCAGGCTGCG ATGAACGTGA GTATTTGCGT GAGCTGCAAA ATGCATTGCT GTGGATTAAC
TTTCGTTTTT ATCTTGCACC GCTGTTCTGG CTGATTGTGG GGGGAACCTG GGGACCCGTT
ACGCTGATGG GGTATGCGTT TTTGCGTGCA TGGCAATACT GGCTGGCGCG TTACCAGACG
CCGCATCATC GTTTACAGTC CGGCATTGAT GGCGTGCTTC ATGTACTGGA TTGGGTGCCG
GTTCGTCTTG CGGGTGTGGT ATATGCCTTG ATCGGTCATG GGGAGAAAGC GTTACCGGCC
TGGTTTGCTT CGCTGGGTGA TTTCCATACT TCGCAATATC AGGTATTAAC GCGTCTGGCA
CAGTTCTCTC TGGCGCGTGA ACCGCATGTC GATAAGGTGG AGACGCCGAA GGCAGCGGTT
TCCATGGCGA AGAAAACCTC GTTCGTGGTC GTGGTGGTAA TTGCGCTACT GACGATTTAC
GGGGCGTTGG TGTAA
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| Protein sequence | MTLFTTLLVL IFERLFKLGE HWQLDHRLEA FFRRVKHFSL GRTLGMTIIA MGVTFLLLRT
LQGVLFNVPT LLVWLLIGLL CIGAGKVRLH YHAYLTAASR NDSHARATMA GELTMIHGVP
AGCDEREYLR ELQNALLWIN FRFYLAPLFW LIVGGTWGPV TLMGYAFLRA WQYWLARYQT
PHHRLQSGID GVLHVLDWVP VRLAGVVYAL IGHGEKALPA WFASLGDFHT SQYQVLTRLA
QFSLAREPHV DKVETPKAAV SMAKKTSFVV VVVIALLTIY GALV
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