| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_0112 |
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| Symbol | nadC |
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| ID | 6147011 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | - |
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| Start bp | 124268 |
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| End bp | 125161 |
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| Gene Length | 894 bp |
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| Protein Length | 297 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 641615013 |
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| Product | quinolinate phosphoribosyltransferase |
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| Protein accession | YP_001742229 |
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| Protein GI | 170681997 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0157] Nicotinate-nucleotide pyrophosphorylase |
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| TIGRFAM ID | [TIGR00078] nicotinate-nucleotide pyrophosphorylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.214233 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 45 |
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| Fosmid unclonability p-value | 0.539382 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCCGCCTC GCCGCTATAA CCCTGACACC CGACGTGACG AGCTGCTGGA ACGCATTAAT
CTCGATATCC CCGGCGCGGT GGCCCAGGCG CTGCGGGAAG ATTTAGGCGG AACAGTCGAT
GCCAACAATG ACATTACGGC AAAACTTTTA CCGGAAAACT CTCGCTCTCA TGCCACAGTG
ATCACCCGCG AGAATGGCGT ATTTTGCGGC AAACGCTGGG TTGAAGAGGT GTTTATTCAA
CTGGCAGGCG ACGATGTCAC CATAATCTGG CATGTGGATG ACGGCGATGT CATCAACGCC
AATCAACCCT TGTTCGAACT TGAAGGCCCA TCTCGCGTGC TGTTAACGGG CGAACGCACT
GCGCTTAATT TTGTGCAAAC CCTTTCAGGA GTTGCCAGTA AGGTACGCCA CTATGTCGAA
TTACTGGAAG GCACCAACAC GCAGCTGTTG GATACGCGCA AAACCTTACC CGGCCTGCGT
TCAGCTCTGA AATACGCGGT ACTTTGCGGC GGCGGAGCGA ATCACCGCCT GGGGCTTTCT
GATGCCTTCC TGATCAAAGA AAATCATATT ATTGCCTCCG GCTCAGTGCG CCAGGCGGTC
GAAAAAGCGT CCTGGTTGCA CCCGGATGCG CCAGTAGAAG TCGAAGTAGA GAATCTGGAA
GAACTTGATG AAGCCCTGAA AGCAGGTGCC GATATCATCA TGCTGGATAA CTTCGAAACA
GAACAGATGC GCGAAGCCGT CAAACGCACC AACGGCAAGG CGCTACTGGA AGTGTCTGGC
AACGTCACTG ACAAAACACT GCGCGAATTT GCCGAAACGG GCGTGGACTT TATCTCCGTC
GGTGCGCTAA CTAAACACGT ACAGGCACTC GACCTATCAA TGCGTTTTTG CTGA
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| Protein sequence | MPPRRYNPDT RRDELLERIN LDIPGAVAQA LREDLGGTVD ANNDITAKLL PENSRSHATV
ITRENGVFCG KRWVEEVFIQ LAGDDVTIIW HVDDGDVINA NQPLFELEGP SRVLLTGERT
ALNFVQTLSG VASKVRHYVE LLEGTNTQLL DTRKTLPGLR SALKYAVLCG GGANHRLGLS
DAFLIKENHI IASGSVRQAV EKASWLHPDA PVEVEVENLE ELDEALKAGA DIIMLDNFET
EQMREAVKRT NGKALLEVSG NVTDKTLREF AETGVDFISV GALTKHVQAL DLSMRFC
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