| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_0110 |
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| Symbol | hofB |
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| ID | 6145896 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | - |
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| Start bp | 122230 |
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| End bp | 123615 |
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| Gene Length | 1386 bp |
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| Protein Length | 461 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 641615011 |
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| Product | hypothetical protein |
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| Protein accession | YP_001742227 |
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| Protein GI | 170681105 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2804] Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.157109 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 45 |
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| Fosmid unclonability p-value | 0.596737 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATATTC CACAGCTCAC CGCCCTGTGT CTGCGTTATC AGGGAGTCTT GCTGGATGCC
AGCGAAGAGG TGGTTCATGT TGCGGTAGTC GATGCACCTT CGCATGAGCT ACTGGACGCA
TTGCATTTCG CTACCACCAA ACGTATTGAG ATCACCTGCT GGACGCGCCA ACAAATGGAA
GGTCACGCCA GTCGCACACA ACAGACATTG CCCGTAGCTG TTCAGGAGAA GCATCAGCCC
AAAGCAGAGT TGCTGACTAG AACGTTACAG TCTGCGCTGG AACAACGCGC GTCTGATATT
CATATCGAAC CAGCGGACAA TGCCTACCGC ATCCGCTTGC GTATCGACGG CGTATTGCAT
CCTTTACCGG TCGTTTCACC GGATGCCGGA GTCGCATTAA CCGCCAGATT AAAAGTGCTG
GGAAATCTGG ATATTGCGGA ACATCGCCTG CCGCAGGACG GGCAATTCAC TGTCGAACTG
GCAGGAAACG CCGTCTCATT TCGTATTGCG ACCTTACCAT GTCGGGGTGG TGAAAAGGTG
GTATTAAGGT TGTTACAGCA GGTGAGCCAG GCACTGGATG TTAACACGCT GGGAATGCAG
CCGTTACAAC TGGCGGACTT TGCTCATGCA TTGCAACAAC CACAGGGATT GGTGCTGGTA
ACTGGCCCTA CAGGCAGCGG CAAAACGGTC ACGCTTTATA GTGCCCTGCA AACGCTGAAT
ACCGCTGACA TTAATATTTG TAGCGTCGAA GATCCGGTTG AGATCCCCAT AGCCGGACTA
AACCAGACGC AAATCCATTC GCGTGCCGGA CTCACCTTTC AGGGCGTTTT GCGTGCGTTA
TTGCGCCAGG ATCCTGACGT CATCATGATC GGAGAGATCC GCGATGGCGA AACGGCAGAA
ATTGCCATTA AAGCCGCGCA AACCGGTCAC CTGGTGTTGT CTACCCTACA CACTAATTCC
ACCTGCGAAA CGCTGGTACG TTTACAGCAA ATGGGAGTCG CCCGCTGGAT GCTATCATCG
GCGCTTACGC TGGTAATAGC CCAGCGTCTG GTACGCAAAC TTTGCCCGCA TTGTCGCCGG
CAGCAAGGGG AGCCCATCCA TATTCCAGAC AATGTATGGC CGTCGCCGCT GCCCCACTGG
CAGGCACCCG GTTGTGTACA TTGCTACCAC GGTTTTTATG GTCGTACGGC CTTATTTGAA
GTTCTACCCA TAACACCGAT CATACGCCAG CTTATTTCCG CTAATACCGA CGTTGAATCG
CTGGAAACAC ACGCCCGACA GGCGGGTATG CGTACGCTTT TTGAAAACGG CTGCCTGGCC
GTGGAGCAAG GCTTAACCAC CTTTGAAGAG TTAATCCGCG TATTGGGGAT GCCGCATGGC
GAGTAA
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| Protein sequence | MNIPQLTALC LRYQGVLLDA SEEVVHVAVV DAPSHELLDA LHFATTKRIE ITCWTRQQME
GHASRTQQTL PVAVQEKHQP KAELLTRTLQ SALEQRASDI HIEPADNAYR IRLRIDGVLH
PLPVVSPDAG VALTARLKVL GNLDIAEHRL PQDGQFTVEL AGNAVSFRIA TLPCRGGEKV
VLRLLQQVSQ ALDVNTLGMQ PLQLADFAHA LQQPQGLVLV TGPTGSGKTV TLYSALQTLN
TADINICSVE DPVEIPIAGL NQTQIHSRAG LTFQGVLRAL LRQDPDVIMI GEIRDGETAE
IAIKAAQTGH LVLSTLHTNS TCETLVRLQQ MGVARWMLSS ALTLVIAQRL VRKLCPHCRR
QQGEPIHIPD NVWPSPLPHW QAPGCVHCYH GFYGRTALFE VLPITPIIRQ LISANTDVES
LETHARQAGM RTLFENGCLA VEQGLTTFEE LIRVLGMPHG E
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