| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_0103 |
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| Symbol | secA |
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| ID | 6146317 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | + |
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| Start bp | 114913 |
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| End bp | 117618 |
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| Gene Length | 2706 bp |
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| Protein Length | 901 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 641615004 |
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| Product | preprotein translocase subunit SecA |
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| Protein accession | YP_001742220 |
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| Protein GI | 170680792 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0653] Preprotein translocase subunit SecA (ATPase, RNA helicase) |
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| TIGRFAM ID | [TIGR00963] preprotein translocase, SecA subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0000742397 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 44 |
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| Fosmid unclonability p-value | 0.588036 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTAATCA AATTATTAAC TAAAGTTTTC GGTAGTCGTA ACGATCGCAC CCTGCGCCGG
ATGCGCAAAG TGGTCAACAT CATCAATGCC ATGGAACCGG AGATGGAAAA ACTCTCCGAT
GAAGAACTGA AAGGGAAAAC CGCAGAGTTC CGCGCGCGTC TGGAAAAAGG CGAAGTGCTG
GAAAACTTGA TCCCGGAAGC CTTCGCTGTG GTGCGTGAAG CCAGTAAGCG TGTTTTTGGT
ATGCGTCACT TCGACGTTCA GTTACTCGGC GGTATGGTTC TTAACGAACG CTGCATCGCC
GAAATGCGTA CCGGTGAAGG TAAAACCCTG ACCGCAACGC TGCCTGCTTA CCTGAACGCA
CTAACCGGTA AAGGCGTGCA TGTAGTTACC GTCAACGACT ACCTGGCGCA ACGTGACGCC
GAAAACAACC GTCCGCTGTT TGAATTCCTT GGCCTGACTG TTGGTATCAA CCTGCCGGGC
ATGCCAGCAC CGGCAAAGCG TGAAGCTTAC GCAGCTGACA TCACTTACGG TACGAACAAC
GAATACGGCT TTGACTACCT GCGCGACAAC ATGGCGTTCA GTCCTGAAGA ACGTGTACAG
CGTAAACTGC ACTATGCGCT GGTGGACGAA GTGGACTCCA TCCTGATCGA TGAAGCGCGT
ACACCGCTGA TCATTTCCGG CCCGGCAGAA GACAGCTCGG AAATGTATAA ACGCGTGAAT
AAAATTATTC CACACCTGAT CCGTCAGGAA AAAGAAGACT CCGAAACCTT CCAGGGCGAA
GGCCACTTCT CGGTGGACGA AAAATCTCGC CAGGTGAACC TGACCGAACG TGGTCTGGTG
CTGATTGAAG AACTGCTGGT GAAAGAAGGC ATCATGGATG AAGGGGAGTC TCTGTACTCT
CCGGCAAACA TCATGCTGAT GCACCACGTA ACGGCGGCGC TGCGCGCTCA TGCGCTGTTT
ACCCGAGACG TCGACTACAT CGTTAAAGAT GGTGAAGTTA TCATCGTTGA CGAACACACC
GGTCGTACCA TGCAGGGACG TCGTTGGTCC GATGGCCTGC ATCAGGCAGT GGAAGCGAAA
GAAGGTGTAC AGATCCAGAA CGAAAACCAG ACGCTGGCGT CGATCACCTT CCAGAACTAC
TTCCGTCTGT ATGAAAAACT GGCGGGGATG ACCGGTACTG CTGATACCGA AGCTTTCGAA
TTCAGCTCCA TCTATAAGCT GGATACCGTC GTTGTTCCGA CCAACCGTCC AATGATTCGT
AAAGATCTGC CGGACCTGGT CTACATGACT GAAGCGGAAA AAATTCAGGC GATCATTGAA
GATATCAAAG AACGTACTGC GAAAGGCCAG CCGGTGCTGG TGGGTACTAT CTCCATCGAA
AAATCTGAGC TGGTGTCAAA CGAACTGACC AAAGCCGGTA TTAAGCACAA CGTCCTGAAC
GCCAAATTCC ATGCCAACGA AGCGGCGATT GTTGCTCAGG CAGGTTATCC GGCTGCGGTG
ACTATCGCGA CCAACATGGC GGGTCGTGGT ACAGATATTG TGCTCGGTGG TAGCTGGCAG
GCAGAAGTTG CCGCGCTGGA AAATCCGACC GCAGAGCAAA TTGAAAAAAT TAAGGCCGAC
TGGCAGGTTC GTCACGATGC GGTACTGGAA GCAGGTGGCC TGCATATCAT CGGTACTGAA
CGTCACGAAT CCCGTCGTAT CGATAACCAG TTGCGCGGTC GTTCTGGTCG TCAGGGGGAT
GCTGGTTCTT CCCGTTTCTA CCTGTCGATG GAAGATGCGC TGATGCGTAT TTTTGCTTCC
GACCGAGTAT CCGGCATGAT GCGTAAACTG GGTATGAAGC CAGGCGAAGC CATTGAACAC
CCGTGGGTGA CTAAAGCGAT TGCCAACGCC CAGCGTAAAG TTGAAAGTCG TAACTTCGAC
ATTCGTAAGC AACTGCTGGA ATATGATGAC GTGGCTAACG ATCAGCGTCG CGCCATTTAC
TCCCAGCGTA ACGAACTGCT GGATGTCAGC GATGTGAGCG AAACCATCAA CAGCATTCGT
GAAGATGTGT TCAAAGCGAC CATTGATGCC TACATTCCGC CACAGTCGCT GGAAGAAATG
TGGGATATTC CGGGACTGCA GGAACGTCTG AAGAACGATT TCGACCTCGA TTTGCCAATT
GCCGAGTGGC TGGATAAAGA ACCAGAACTG CATGAAGAGA CGCTGCGTGA GCGCATTCTG
GCGCAGTCCA TCGAAGTGTA TCAGCGTAAA GAAGAAGTGG TTGGTGCTGA GATGATGCGT
CACTTCGAAA AAGGCGTCAT GCTGCAAACT CTCGACTCTC TGTGGAAAGA GCACCTGGCG
GCGATGGACT ATCTGCGTCA GGGTATCCAC CTGCGTGGCT ATGCACAGAA AGATCCGAAG
CAGGAATACA AACGTGAATC GTTCTCCATG TTTGCAGCGA TGCTGGAGTC GTTGAAATAT
GAAGTTATCA GCACGCTGAG CAAAGTTCAG GTACGTATGC CTGAAGAGGT TGAGGAGCTG
GAACAACAGC GTCGTATGGA AGCCGAGCGT TTAGCGCAAA TGCAGCAGCT TAGCCATCAG
GATGACGACT CTGCAGCTGC AGCTGCACTG GCGGCGCAAA CCGGTGAGCG CAAAGTAGGA
CGTAACGATC CTTGCCCGTG CGGTTCTGGT AAAAAATACA AGCAGTGCCA TGGTCGCCTG
CAATAA
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| Protein sequence | MLIKLLTKVF GSRNDRTLRR MRKVVNIINA MEPEMEKLSD EELKGKTAEF RARLEKGEVL
ENLIPEAFAV VREASKRVFG MRHFDVQLLG GMVLNERCIA EMRTGEGKTL TATLPAYLNA
LTGKGVHVVT VNDYLAQRDA ENNRPLFEFL GLTVGINLPG MPAPAKREAY AADITYGTNN
EYGFDYLRDN MAFSPEERVQ RKLHYALVDE VDSILIDEAR TPLIISGPAE DSSEMYKRVN
KIIPHLIRQE KEDSETFQGE GHFSVDEKSR QVNLTERGLV LIEELLVKEG IMDEGESLYS
PANIMLMHHV TAALRAHALF TRDVDYIVKD GEVIIVDEHT GRTMQGRRWS DGLHQAVEAK
EGVQIQNENQ TLASITFQNY FRLYEKLAGM TGTADTEAFE FSSIYKLDTV VVPTNRPMIR
KDLPDLVYMT EAEKIQAIIE DIKERTAKGQ PVLVGTISIE KSELVSNELT KAGIKHNVLN
AKFHANEAAI VAQAGYPAAV TIATNMAGRG TDIVLGGSWQ AEVAALENPT AEQIEKIKAD
WQVRHDAVLE AGGLHIIGTE RHESRRIDNQ LRGRSGRQGD AGSSRFYLSM EDALMRIFAS
DRVSGMMRKL GMKPGEAIEH PWVTKAIANA QRKVESRNFD IRKQLLEYDD VANDQRRAIY
SQRNELLDVS DVSETINSIR EDVFKATIDA YIPPQSLEEM WDIPGLQERL KNDFDLDLPI
AEWLDKEPEL HEETLRERIL AQSIEVYQRK EEVVGAEMMR HFEKGVMLQT LDSLWKEHLA
AMDYLRQGIH LRGYAQKDPK QEYKRESFSM FAAMLESLKY EVISTLSKVQ VRMPEEVEEL
EQQRRMEAER LAQMQQLSHQ DDDSAAAAAL AAQTGERKVG RNDPCPCGSG KKYKQCHGRL
Q
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