Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcSMS35_0090 |
Symbol | murE |
ID | 6145782 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli SMS-3-5 |
Kingdom | Bacteria |
Replicon accession | NC_010498 |
Strand | + |
Start bp | 99799 |
End bp | 101286 |
Gene Length | 1488 bp |
Protein Length | 495 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 641614991 |
Product | UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase |
Protein accession | YP_001742207 |
Protein GI | 170682313 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0769] UDP-N-acetylmuramyl tripeptide synthase |
TIGRFAM ID | [TIGR01085] UDP-N-acetylmuramyl-tripeptide synthetase |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.764756 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 52 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGCAGATC GTAATTTGCG CGACCTTCTT GCTCCGTGGG TGCCAGACGC ACCTTCGCGA GCACTGCGAG AGATGACACT CGACAGCCGT GTGGCTGCGG CGGGCGATCT CTTTGTAGCT GTAGTAGGTC ATCAGGCGGA CGGGCGTCGA TATATCCCGC AGGCGATAGC GCAAGGTGTG GCTGCCATTA TTGCAGAGGC GAAAGATGAG GCGACCGACG GTGAAATCCG TGAAATGCAC GGCGTACCGG TCATCTATCT CAGCCAGCTC AACGAGCGTT TATCTGCACT GGCGGGCCGC TTTTACCATG AACCCTCTGA TAATTTACGT CTTGTAGGCG TAACGGGCAC CAACGGCAAA ACCACGACGA CCCAGCTGCT GGCACAGTGG AGCCAACTGC TTGGCGAAAC CAGCGCGGTA ATGGGCACCG TTGGTAACGG CCTGCTGGGG AAAGTGATCC CGACAGAAAA TACCACCGGT TCGGCAGTCG ATGTTCAGCA TGAGCTGGCG GGGCTGGTGG ATCAGGGCGC GACTTTTTGC GCAATGGAAG TCTCTTCCCA CGGGCTGGTA CAGCATCGCG TGGCGGCGCT GAAATTTGCC GCATCGGTCT TTACCAACTT AAGCCGCGAT CACCTTGATT ATCATGGTGA TATGGAACAC TACGAAGCCG CGAAATGGCT GCTTTATTCT GAACATCGTT GCGGTCAGGC GATTATTAAC GCCGACGATG AAGTGGGCCG CCGCTGGCTG GCAAAACTGC CGGACGCGGT TGCGGTATCA ATGGAAGATC ATATCAATCT GAACTGTCAC GGACGCTGGT TGAAAGCGAC CGAAGTGAAC TATCACGACA GCGGTGCGAC GATTCGCTTT AGCTCAAGCT GGGGCGATGG CGAAATTGAA AGCCATCTGA TGGGCGCTTT TAACGTCAGC AACCTGCTGC TTGCGCTGGC GACACTGCTG GCACTCGGCT ACCCGCTCGC TGATCTGTTA AAAACCGCCG CGCGTCTGCA ACCGGTTTGC GGACGTATGG AAGTGTTCAC TGCGCCAGGC AAACCGACGG TGGTGGTGGA TTACGCGCAT ACGCCGGATG CACTGGAAAA AGCCTTACAG GCGGCGCGCC TGCACTGTGC GGGCAAGCTG TGGTGCGTCT TTGGCTGTGG TGGCGATCGT GATAAAGGCA AACGTCCACT GATGGGCGCA ATTGCTGAAG AGTTTGCTGA CGTGGCGGTG GTAACGGACG ATAACCCGCG TACCGAAGAA CCGCGTGCCA TCATCAACGA TATTCTGGCG GGAATGTTAG ATGCCGGACA TGCCAAAGTG ATGGAAGGCC GTGCTGAAGC GGTGACTTGC GCCGTTATGC AGGCTAAAGA GAATGATGTG GTACTGGTCG CGGGCAAAGG TCATGAGGAT TACCAGATTG TTGGCAATCA GCGTCTGGAC TACTCCGATC GCGTCACGGT GGCGCGTCTG CTGGGGGTGA TTGCATGA
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Protein sequence | MADRNLRDLL APWVPDAPSR ALREMTLDSR VAAAGDLFVA VVGHQADGRR YIPQAIAQGV AAIIAEAKDE ATDGEIREMH GVPVIYLSQL NERLSALAGR FYHEPSDNLR LVGVTGTNGK TTTTQLLAQW SQLLGETSAV MGTVGNGLLG KVIPTENTTG SAVDVQHELA GLVDQGATFC AMEVSSHGLV QHRVAALKFA ASVFTNLSRD HLDYHGDMEH YEAAKWLLYS EHRCGQAIIN ADDEVGRRWL AKLPDAVAVS MEDHINLNCH GRWLKATEVN YHDSGATIRF SSSWGDGEIE SHLMGAFNVS NLLLALATLL ALGYPLADLL KTAARLQPVC GRMEVFTAPG KPTVVVDYAH TPDALEKALQ AARLHCAGKL WCVFGCGGDR DKGKRPLMGA IAEEFADVAV VTDDNPRTEE PRAIINDILA GMLDAGHAKV MEGRAEAVTC AVMQAKENDV VLVAGKGHED YQIVGNQRLD YSDRVTVARL LGVIA
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