| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_0071 |
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| Symbol | thiP |
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| ID | 6145002 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | - |
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| Start bp | 79757 |
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| End bp | 81367 |
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| Gene Length | 1611 bp |
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| Protein Length | 536 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 641614972 |
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| Product | thiamine transporter membrane protein |
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| Protein accession | YP_001742188 |
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| Protein GI | 170682672 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1178] ABC-type Fe3+ transport system, permease component |
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| TIGRFAM ID | [TIGR01253] thiamine ABC transporter, permease protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.818645 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 0.387113 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAACGC GCCGTCAGCC GTTAATTCCC GGCTGGTTAA TTCCAGGTGT AAGCGCCGCT
ACGCTTGTGG TGGCGGTTGC GCTGGCGGCG TTTCTCGCCC TGTGGTGGAA CGCGCCGCAG
GGTGACTGGG TGGCAGTCTG GCAGGACAGC TATCTGTGGC ATGTGGTGCG CTTCTCCTTC
TGGCAGGCGT TTCTCTCGGC GCTGCTCTCT GTCGTTCCGG CGATATTCCT CGCCCGCGCC
CTCTATCGCA GGCGCTTTCC AGGTCGGCTG GCGCTGTTGC GTCTGTGCGC AATGACCTTG
ATCCTCCCGG TGCTGGTCGC TGTTTTCGGC ATTCTTAGCG TCTATGGTCG CCAGGGCTGG
CTGGCCTCGC TCTGGCAATC ACTTGGTCTG GAGTGGACCT TTTCGCCCTA CGGCCTGCAA
GGTATTTTGC TGGCGCACGT ATTTTTTAAT CTGCCGATGG CGAGCCGTTT ATTACTTCAG
GCACTGGAAA ACATTCCCGG CGAACAACGT CAACTTGCCG CACAACTTGG GATGCGCGGC
TGGCATTTTT TCCGCTTTGT CGAATGGCCG TGGTTACGTC GACAAATCCC GCCAGTTGCT
GCGCTTATCT TTATGCTCTG TTTCGCCAGC TTCGCCACCG TGCTATCGCT GGGGGGCGGT
CCGCAGGCGA CCACTATCGA GCTGGCTATT TATCAGGCGC TGAGTTACGA CTACGATCCT
GCCCGCGCGG CGATGCTTGC GCTGATCCAG ATGGTGTGTT GCCTTGGGCT GGTGCTGCTG
AGTCAGCGAT TGAGTAAGGC CATTGCGCCA GGCACCACGC TGCTGCAAGG CTGGCGCGAC
CCGGACGATC GTCTGCATAG CCGCATTTGC GACACTGTGT TAATTGTGCT GGCGCTGCTG
CTATTGCTGC CACCGTTACT GGCGGTGATC GTCGATGGGG TAAATCGCCA GTTGCCGGAA
GTGCTGGCAC AACCGGTGCT GTGGCAGGCG CTGTGGACCT CGTTGCGTAT TGCGCTGGCG
GCAGGCGTAT TGTGCGTAGT GCTGACCATG ATGCTGCTAT GGAGCAGTCG CGAACTGCGG
GCGCGGCAGA AAATGCTGGC CGGCCAGGCG CTGGAGATGA GCGGCATGTT GATCCTCGCC
ATGCCGGGGA TTGTGCTGGC AACGGGCTTC TTTTTACTGC TCAACAACAC TATCGGCCTG
CCACAATCTG CTGACGGCAT TGTGATTTTC ACCAATGCGT TAATGGCGAT CCCTTATGCG
CTGAAAGTGC TGGAAAACCC GATGCGCGAT ATCACCGCTC GCTACAACAT GTTATGTCAG
TCGCTGGGCA TTGAAGGCTG GTCACGCTTA AAAGTGGTGG AGCTGCGCGC CCTGAAACGT
CCGCTGGCGC AGGCACTGGC CTTTGCTTGT GTGCTGTCGA TTGGTGATTT TGGCGTGGTG
GCGTTGTTCG GTAACGATGA TTTCCGTACC CTGCCGTTTT ATCTCTACCA GCAAATTGGC
TCCTATCGCA GCCAGGACGG CGCGGTCACC GCGTTAATTA TGCTGCTACT CTGTTTTCTG
CTGTTTACTG TGATTGAAAA ACTACCGGGG CGAAATGTTA AAACTGACTG A
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| Protein sequence | MATRRQPLIP GWLIPGVSAA TLVVAVALAA FLALWWNAPQ GDWVAVWQDS YLWHVVRFSF
WQAFLSALLS VVPAIFLARA LYRRRFPGRL ALLRLCAMTL ILPVLVAVFG ILSVYGRQGW
LASLWQSLGL EWTFSPYGLQ GILLAHVFFN LPMASRLLLQ ALENIPGEQR QLAAQLGMRG
WHFFRFVEWP WLRRQIPPVA ALIFMLCFAS FATVLSLGGG PQATTIELAI YQALSYDYDP
ARAAMLALIQ MVCCLGLVLL SQRLSKAIAP GTTLLQGWRD PDDRLHSRIC DTVLIVLALL
LLLPPLLAVI VDGVNRQLPE VLAQPVLWQA LWTSLRIALA AGVLCVVLTM MLLWSSRELR
ARQKMLAGQA LEMSGMLILA MPGIVLATGF FLLLNNTIGL PQSADGIVIF TNALMAIPYA
LKVLENPMRD ITARYNMLCQ SLGIEGWSRL KVVELRALKR PLAQALAFAC VLSIGDFGVV
ALFGNDDFRT LPFYLYQQIG SYRSQDGAVT ALIMLLLCFL LFTVIEKLPG RNVKTD
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