| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_0070 |
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| Symbol | thiQ |
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| ID | 6145331 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | - |
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| Start bp | 79075 |
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| End bp | 79773 |
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| Gene Length | 699 bp |
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| Protein Length | 232 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 641614971 |
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| Product | thiamine transporter ATP-binding subunit |
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| Protein accession | YP_001742187 |
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| Protein GI | 170680825 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG3840] ABC-type thiamine transport system, ATPase component |
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| TIGRFAM ID | [TIGR01277] thiamine ABC transporter, ATP-binding protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.351626 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 46 |
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| Fosmid unclonability p-value | 0.566701 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTTAAAAC TGACTGATAT CACCTGGCTT TATCACCATT TGCCGATGCG TTTTAGCTTA
ACGGTAGAAC GCGGCGAGCA GGTGGCGATC CTCGGGCCAA GCGGCGCGGG TAAAAGTACC
CTGCTGAATT TGATCGCCGG TTTTCTGACG CCAGCCAGCG GTTCGCTGAC TATCGATGGC
GTTGATCACA CCACGACGCC GCCGTCACGC CGTCCGGTGT CGATGCTGTT TCAGGAGAAC
AACCTGTTCA GTCACCTGAC GGTCGCGCAG AACATTGGGC TGGGGCTAAA TCCGGGATTG
AAACTAAATT CGGCGCAGCA GGAGAAAATG CACGCTATCG CCCGTCAAAT GGGAATTGAT
AATTTAATGG CGCGGTTACC GGGCGAGCTT TCCGGCGGTC AGCGACAGCG CGTGGCGTTA
GCGCGTTGTC TGGTACGCGA ACAGCCGATT TTATTGCTCG ATGAACCGTT CTCTGCGCTC
GATCCGGCGT TACGCCAGGA GATGTTGACG CTAGTGAGCA CGAGCTGCCA ACAGCAAAAA
ATGACGCTAT TGATGGTGTC GCACAGTGTG GAAGATGCGG CGCGGATCGC CACGCGCTCG
GTGGTGGTCG CCGACGGGCG CATCGCCTGG CAGGGTAAGA CTGATGAGTT GTTGAGCGGT
AAGGCGAGTG CTTCGGCACT ATTGGGGATT ACGGGTTAA
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| Protein sequence | MLKLTDITWL YHHLPMRFSL TVERGEQVAI LGPSGAGKST LLNLIAGFLT PASGSLTIDG
VDHTTTPPSR RPVSMLFQEN NLFSHLTVAQ NIGLGLNPGL KLNSAQQEKM HAIARQMGID
NLMARLPGEL SGGQRQRVAL ARCLVREQPI LLLDEPFSAL DPALRQEMLT LVSTSCQQQK
MTLLMVSHSV EDAARIATRS VVVADGRIAW QGKTDELLSG KASASALLGI TG
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