Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcSMS35_0069 |
Symbol | |
ID | 6145829 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli SMS-3-5 |
Kingdom | Bacteria |
Replicon accession | NC_010498 |
Strand | + |
Start bp | 78241 |
End bp | 79005 |
Gene Length | 765 bp |
Protein Length | 254 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 641614970 |
Product | hypothetical protein |
Protein accession | YP_001742186 |
Protein GI | 170681148 |
COG category | [S] Function unknown |
COG ID | [COG0586] Uncharacterized membrane-associated protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.820004 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 47 |
Fosmid unclonability p-value | 0.658906 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAAGCAT TGCTGGAACA CTTTATTACC CAATCCACCG TGTATTCATT GATGGCGGTG GTGTTGGTGG CCTTTCTGGA GTCGCTGGCG CTGGTCGGTT TGATTTTACC CGGTACGGTG CTAATGGCGG GACTGGGGGC GCTGATTGGC AGTGGCGAGT TAAGTTTCTG GCACGCCTGG CTGGCAGGGA TCGTCGGTTG CCTGCTGGGC GACTGGATCT CTTTCTGGCT GGGCTGGCGT TTTAAAAAGC CATTGCATCG CTGGTCATTT CTGAAGAAAA ACAAAGCATT ACTCGATAAA ACTGAACATG CGTTGCATCA ACACAGCATG TTCACCATTC TGGTCGGTCG CTTTGTTGGC CCGACGCGTC CGCTGGTGCC AATGGTGGCG GGAATGCTGG ATCTCCCGGT GGCAAAATTT ATTACGCCGA ATATTATCGG CTGCCTGCTG TGGCCACCGT TTTACTTCCT GCCGGGGATT CTGGCGGGTG CGGCGATCGA TATTCCTGCC GGGATGCAGA GTGGTGAGTT TAAATGGTTG CTGCTGGCGA CGGCGGTATT TTTGTGGGTT GGGGGCTGGC TGTGCTGGCG GTTATGGCGC AGCGGTAAAG CGACTGACCG TTTGAGTCAT TATTTGTCGC GCGGTCGTTT GTTGTGGCTG ACGCCGTTGA TTTCTGCCAT CGGCGTGGTG GCGCTGGTGG TGTTAATTCG CCACCCGTTG ATGCCGGTGT ATATCGATAT TTTGCGTAAA GTGGTTGGGG TTTAG
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Protein sequence | MQALLEHFIT QSTVYSLMAV VLVAFLESLA LVGLILPGTV LMAGLGALIG SGELSFWHAW LAGIVGCLLG DWISFWLGWR FKKPLHRWSF LKKNKALLDK TEHALHQHSM FTILVGRFVG PTRPLVPMVA GMLDLPVAKF ITPNIIGCLL WPPFYFLPGI LAGAAIDIPA GMQSGEFKWL LLATAVFLWV GGWLCWRLWR SGKATDRLSH YLSRGRLLWL TPLISAIGVV ALVVLIRHPL MPVYIDILRK VVGV
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