| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_0038 |
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| Symbol | caiC |
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| ID | 6143120 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | - |
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| Start bp | 41450 |
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| End bp | 43003 |
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| Gene Length | 1554 bp |
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| Protein Length | 517 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 641614939 |
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| Product | putative crotonobetaine/carnitine-CoA ligase |
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| Protein accession | YP_001742155 |
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| Protein GI | 170681586 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.565789 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 52 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATATCA TTGGCGGACA ACATCTACGT CAAATGTGGG ACGATCTGGC GGACGTTTAC
GGTCATAAAA CGGCGCTGAT TTGTGAATCC AGCGGCGGAG TCGTTAACCG GTATAGTTAT
CTTGAGTTAA ATCAGGAGAT TAACCGCACG GCAAACCTGT TTTATACGCT GGGGATTCGC
AAAGGCGACA AGGTTGCTCT ACATCTCGAC AACTGCCCGG AATTTATCTT TTGCTGGTTC
GGGCTGGCAA AAATTGGCGC GATTATGGTG CCGATTAACG CCCGCCTGTT ACGCGAGGAA
AGCGCGTGGA TCCTGCAAAA TAGCCAGGCG TGCCTGCTGG TGACCAGTGC GCAATTCTAT
CCCATGTATC AACAGATTCA GCAGGAAGAT GCCACGCAGT TGCGGCACAT TTGCCTGACA
GATGTGGCAC TTCCCGCTGA TGATGGCGTG AGTTCGTTTA CTCAACTGAA AAATCAACAA
CCTGCCACCT TGTGCTATGC ACCGCCGCTA TCGACTGACG ATACGGCGGA AATTCTCTTC
ACCTCCGGCA CTACCTCCCG ACCGAAAGGT GTGGTGATTA CCCATTACAA CCTGCGCTTC
GCTGGATATT ACTCCGCCTG GCAGTGTGCA CTGCGTGACG ATGACGTCTA CCTGACGGTA
ATGCCTGCGT TTCATATCGA TTGCCAGTGT ACTGCGGCGA TGGCGGCGTT TTCTGCCGGG
GCCACCTTTG TGCTGGTCGA GAAATACAGC GCCCGCGCCT TCTGGGGACA GGTGCAGAAG
TACCGCGCCA CCATTACCGA ATGTATTCCG ATGATGATCC GTACCTTGAT GGTGCAACCG
CCTTCTGCGA ACGATCAGCA ACACCGCCTG CGGGAAGTGA TGTTTTATCT CAACTTGTCG
GCGCAGGAAA AAGACGCATT TTGTGAACGC TTCGGCGTTC GCTTGCTGAC GTCTTATGGG
ATGACGGAAA CCATTGTGGG CATTATCGGC GATCGCCCTG GCGATAAACG GCGCTGGCCG
TCGATTGGTC GGGCGGGCTT TTGCTACGAA GCGGAGATCC GCGACGATCA CAATCGCCCG
CTCCCGGCAG GTGAGATCGG TGAAATCTGT ATTAAAGGCG TACCAGGGAA AACCATCTTC
AAAGAGTATT TTCTCAACCC GAAAGCCACT GCGAAAGTGC TGGAAGCCGA CGGCTGGCTA
CATACCGGCG ATACCGGATA CCGCGACGAA GAGGGCTTTT TTTATTTCGT CGATCGCCGC
TGCAATATGA TCAAACGCGG TGGCGAGAAT GTCTCCTGCG TGGAGCTCGA AAATATCATC
GCCACCCATC CAAAAATTCA GGATATCGTG GTTGTGGGAA TTAAAGATTC GATACGCGAT
GAAGCCATCA AAGCATTTGT GGTGCTGAAT GAAGGTGAAA CATTGAGCGA AGAGGAATTT
TTCCGCTTCT GCGAACAAAA TATGGCGAAA TTTAAAGTGC CCTCTTATCT GGAGATCAGA
AAAGATCTGC CACGTAATTG CTCGGGGAAA ATAATTAGAA AGAATCTGAA ATAA
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| Protein sequence | MDIIGGQHLR QMWDDLADVY GHKTALICES SGGVVNRYSY LELNQEINRT ANLFYTLGIR
KGDKVALHLD NCPEFIFCWF GLAKIGAIMV PINARLLREE SAWILQNSQA CLLVTSAQFY
PMYQQIQQED ATQLRHICLT DVALPADDGV SSFTQLKNQQ PATLCYAPPL STDDTAEILF
TSGTTSRPKG VVITHYNLRF AGYYSAWQCA LRDDDVYLTV MPAFHIDCQC TAAMAAFSAG
ATFVLVEKYS ARAFWGQVQK YRATITECIP MMIRTLMVQP PSANDQQHRL REVMFYLNLS
AQEKDAFCER FGVRLLTSYG MTETIVGIIG DRPGDKRRWP SIGRAGFCYE AEIRDDHNRP
LPAGEIGEIC IKGVPGKTIF KEYFLNPKAT AKVLEADGWL HTGDTGYRDE EGFFYFVDRR
CNMIKRGGEN VSCVELENII ATHPKIQDIV VVGIKDSIRD EAIKAFVVLN EGETLSEEEF
FRFCEQNMAK FKVPSYLEIR KDLPRNCSGK IIRKNLK
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