Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcSMS35_0029 |
Symbol | dapB |
ID | 6145167 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli SMS-3-5 |
Kingdom | Bacteria |
Replicon accession | NC_010498 |
Strand | + |
Start bp | 33521 |
End bp | 34342 |
Gene Length | 822 bp |
Protein Length | 273 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 641614930 |
Product | dihydrodipicolinate reductase |
Protein accession | YP_001742146 |
Protein GI | 170682871 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0289] Dihydrodipicolinate reductase |
TIGRFAM ID | [TIGR00036] dihydrodipicolinate reductase |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.732281 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 55 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCATGATG CAAACATCCG CGTTGCCATC GCGGGAGCCG GGGGGCGTAT GGGCCGCCAG TTGATTCAGG CGGCGCTGGC ATTAGAAGGC GTGCAGCTGG GCGCGGCGCT GGAGCGCGAA GGATCTTCTT TACTGGGCAG CGACGCCGGT GAGCTGGCGG GTGCAGGAAA AACAGGCGTT ACTGTGCAAA GCAGCCTTGA TGCGATAAAA GATGATTTTG ATGTGTTTAT CGATTTTACC CGTCCGGAAG GTACGCTGAA CCATCTCGCT TTTTGTCGCC AGCATGGCAA AGGGATGGTG ATCGGCACTA CGGGGTTTGA CGAAGCCGGT AAACAGGCGA TTCGTGACGC CGCCGCCGAT ATTGCGATTG TCTTTGCCGC CAATTTTAGC GTTGGCGTTA ACGTCATGCT TAAACTGCTG GAGAAAGCAG CCAAAGTGAT GGGGGACTAC ACCGATATCG AAATTATTGA AGCACATCAT AGACATAAAG TTGATGCGCC GTCAGGCACC GCACTGGCAA TGGGAGAGGC GATCGCCCAC GCTCTTGATA AAGATCTGAA AGATTGCGCG GTCTACAGTC GTGAAGGCCA TACCGGTGAA CGTGTGCCTG GCACCATTGG TTTTGCCACC GTGCGTGCAG GTGACATCGT TGGCGAACAT ACCGCGATGT TTGCCGATAT TGGCGAGCGT CTGGAGATCA CCCATAAGGC ATCCAGCCGC ATGACATTTG CTAACGGTGC GGTAAGATCG GCTTTGTGGT TGAGTGGTAA GGAAAGTGGT CTTTTTGATA TGCGAGATGT GCTTGATCTC AATAATCTGT AA
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Protein sequence | MHDANIRVAI AGAGGRMGRQ LIQAALALEG VQLGAALERE GSSLLGSDAG ELAGAGKTGV TVQSSLDAIK DDFDVFIDFT RPEGTLNHLA FCRQHGKGMV IGTTGFDEAG KQAIRDAAAD IAIVFAANFS VGVNVMLKLL EKAAKVMGDY TDIEIIEAHH RHKVDAPSGT ALAMGEAIAH ALDKDLKDCA VYSREGHTGE RVPGTIGFAT VRAGDIVGEH TAMFADIGER LEITHKASSR MTFANGAVRS ALWLSGKESG LFDMRDVLDL NNL
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