| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_0025 |
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| Symbol | lspA |
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| ID | 6143321 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | + |
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| Start bp | 30391 |
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| End bp | 30885 |
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| Gene Length | 495 bp |
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| Protein Length | 164 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 641614926 |
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| Product | lipoprotein signal peptidase |
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| Protein accession | YP_001742142 |
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| Protein GI | 170679728 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0597] Lipoprotein signal peptidase |
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| TIGRFAM ID | [TIGR00077] lipoprotein signal peptidase |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.258735 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 56 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGTCAAT CGATCTGTTC AACAGGGCTA CGCTGGCTGT GGCTGGTGGT AGTCGTGCTG
ATTATCGATC TGGGCAGCAA ATACCTGATC CTCCAGAACT TTGCTCTGGG GGATACGGTC
CCGCTGTTCC CGTCGCTTAA TCTGCATTAT GCGCGTAACT ATGGCGCGGC GTTTAGTTTC
CTTGCCGATA GCGGCGGCTG GCAGCGTTGG TTCTTTGCCG GTATTGCGAT TGGTATTAGC
GTGATCCTGG CAGTGATGAT GTATCGCTCG AAGGCCACGC AGAAGCTAAA CAATATCGCT
TACGCGCTGA TTATTGGCGG TGCGCTGGGC AACCTGTTCG ACCGCCTGTG GCACGGCTTC
GTTGTCGATA TGATCGACTT CTACGTCGGC GACTGGCACT TCGCTACCTT CAACCTTGCC
GATACTGCCA TCTGTGTCGG TGCGGCACTG ATTGTGCTGG AAGGTTTTTT GCCTTCTAAA
GCGAAAAAAC AATAA
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| Protein sequence | MSQSICSTGL RWLWLVVVVL IIDLGSKYLI LQNFALGDTV PLFPSLNLHY ARNYGAAFSF
LADSGGWQRW FFAGIAIGIS VILAVMMYRS KATQKLNNIA YALIIGGALG NLFDRLWHGF
VVDMIDFYVG DWHFATFNLA DTAICVGAAL IVLEGFLPSK AKKQ
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