Gene EcSMS35_0014 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_0014 
Symbol 
ID6143168 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp16050 
End bp16811 
Gene Length762 bp 
Protein Length253 aa 
Translation table11 
GC content41% 
IMG OID641614915 
Producthypothetical protein 
Protein accessionYP_001742131 
Protein GI170681886 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.415315 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones58 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTGCCA AAAGACGGCT TCTTATTGCG TGTGCCCTGA CAACGATTTT CTATCACCTT 
CCTGCATATT CTTCATTAGA ATATAAAGGT TCCTTTGGCT CAATAAATGC AGGTTATGCT
GACTGGAATA GTGGCTTCGT TAACACTCAT CGTGGTGAAG TATGGAAAGT GACTGCAGAC
TTTGGTGTGA ATTTTAAAGA AGCCGAGTTT TACTCATTTT ATGAAAGCAA TGTGCTTAAC
CATGCCGTAG CGGGGCGTAA TCATACCGTT TCTGCTATGA CACATGTCAG ACTCTTTGAC
TCCAATATGA CTTTCTTTGG CAAGATCTAT GGTCAATGGG ATAACTCATG GGGTGACGAT
CTTGATATGT TTTATGGTTT GGGCTACCTC GGCTGGAATG GTTCATGGGG GTTTTTTAAA
CCGTATATTG GATTACATAA TCAATCTGGA GACTACGTCT CAGCCAAATA TGGACAAACA
AATGGCTGGA ATGGTTATGT TGTTGGCTGG ACAGCAGTAT TACCTTTTAC GTTATTTGAC
GAAAAATTTG TTTTATCTAA CTGGAATGAA ATAGAACTGG ACAGAAATGA TGCCTATGCG
GAACAACAAT TTGGTCGGAA TGGGCTAAAT GGCGGTTTAA CAGTGGCCTG GAAGTTCTAT
CCTCGCTGGA AAGCCAGTGT GACGTGGCGT TATTTCGATA ATAAGTTGGG CTACGATGGT
TTTGGCGATC AAATGATTTA TATGCTTGGT TATGATTTCT AA
 
Protein sequence
MSAKRRLLIA CALTTIFYHL PAYSSLEYKG SFGSINAGYA DWNSGFVNTH RGEVWKVTAD 
FGVNFKEAEF YSFYESNVLN HAVAGRNHTV SAMTHVRLFD SNMTFFGKIY GQWDNSWGDD
LDMFYGLGYL GWNGSWGFFK PYIGLHNQSG DYVSAKYGQT NGWNGYVVGW TAVLPFTLFD
EKFVLSNWNE IELDRNDAYA EQQFGRNGLN GGLTVAWKFY PRWKASVTWR YFDNKLGYDG
FGDQMIYMLG YDF