Gene EcSMS35_0005 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_0005 
Symbol 
ID6144732 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp5569 
End bp6345 
Gene Length777 bp 
Protein Length258 aa 
Translation table11 
GC content49% 
IMG OID641614906 
Producthypothetical protein 
Protein accessionYP_001742122 
Protein GI170682084 
COG category[S] Function unknown 
COG ID[COG3022] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones52 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGATTC TTATTTCACC TGCGAAAACG CTTGATTACC AAAGCCCGTT GCCCACCACG 
CGCTATACGC TGCCGGAGCT GTTAGACAAC TCCCAGCAGC TGATCCATGA AGCGCGGAAA
CTGACGCCCC CGCAGATTAG CTCCCTGATG CGCATCAGCG ACAAACTGGC GGGTATCAAC
GCCGCTCGCT TTCATGACTG GCAGCCAGAT TTCACGTCGG AGAATGCCCG CCAGGCGATT
CTGGCATTTA AAGGTGATGT CTACACCGGC TTGCAGGCCG AAACCTTCAG CGAAGACGAT
TTCGATTTTG CCCAACAGCA TTTGCGAATG CTTTCCGGCT TGTATGGCGT ACTGCGCCCG
CTCGATTTAA TGCAGCCTTA TCGTCTGGAA ATGGGGATAC GTCTTGAGAA TGCCCGAGGG
AAAGATCTGT ATCAATTCTG GGGAGATATC ATCACCAACA AGCTGAACGA GGCGCTCGCA
GCACAAGGCG ATAATGTGGT GATAAATCTG GCGTCAGATG AGTATTTTAA ATCGGTGAAG
CCGAAGAAAT TGAATGCCGA GATTATCAAG CCAGTGTTCC TCGATGAGAA GAACGGCAAA
TTTAAGATAA TCAGCTTCTA CGCTAAGAAA GCACGCGGTC TGATGAGTCG TTTCATTATT
GAAAATCGGC TGACCAAACC AGAGCAACTG ACTGGTTTTA ATAGCGAAGG TTACTTCTTT
GATGAAGCTT CCTCCAGCAA TGGCGAACTG GTGTTTAAAC GCTACGAGCA GCGTTAA
 
Protein sequence
MLILISPAKT LDYQSPLPTT RYTLPELLDN SQQLIHEARK LTPPQISSLM RISDKLAGIN 
AARFHDWQPD FTSENARQAI LAFKGDVYTG LQAETFSEDD FDFAQQHLRM LSGLYGVLRP
LDLMQPYRLE MGIRLENARG KDLYQFWGDI ITNKLNEALA AQGDNVVINL ASDEYFKSVK
PKKLNAEIIK PVFLDEKNGK FKIISFYAKK ARGLMSRFII ENRLTKPEQL TGFNSEGYFF
DEASSSNGEL VFKRYEQR