Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcSMS35_0005 |
Symbol | |
ID | 6144732 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli SMS-3-5 |
Kingdom | Bacteria |
Replicon accession | NC_010498 |
Strand | - |
Start bp | 5569 |
End bp | 6345 |
Gene Length | 777 bp |
Protein Length | 258 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 641614906 |
Product | hypothetical protein |
Protein accession | YP_001742122 |
Protein GI | 170682084 |
COG category | [S] Function unknown |
COG ID | [COG3022] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 52 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGATTC TTATTTCACC TGCGAAAACG CTTGATTACC AAAGCCCGTT GCCCACCACG CGCTATACGC TGCCGGAGCT GTTAGACAAC TCCCAGCAGC TGATCCATGA AGCGCGGAAA CTGACGCCCC CGCAGATTAG CTCCCTGATG CGCATCAGCG ACAAACTGGC GGGTATCAAC GCCGCTCGCT TTCATGACTG GCAGCCAGAT TTCACGTCGG AGAATGCCCG CCAGGCGATT CTGGCATTTA AAGGTGATGT CTACACCGGC TTGCAGGCCG AAACCTTCAG CGAAGACGAT TTCGATTTTG CCCAACAGCA TTTGCGAATG CTTTCCGGCT TGTATGGCGT ACTGCGCCCG CTCGATTTAA TGCAGCCTTA TCGTCTGGAA ATGGGGATAC GTCTTGAGAA TGCCCGAGGG AAAGATCTGT ATCAATTCTG GGGAGATATC ATCACCAACA AGCTGAACGA GGCGCTCGCA GCACAAGGCG ATAATGTGGT GATAAATCTG GCGTCAGATG AGTATTTTAA ATCGGTGAAG CCGAAGAAAT TGAATGCCGA GATTATCAAG CCAGTGTTCC TCGATGAGAA GAACGGCAAA TTTAAGATAA TCAGCTTCTA CGCTAAGAAA GCACGCGGTC TGATGAGTCG TTTCATTATT GAAAATCGGC TGACCAAACC AGAGCAACTG ACTGGTTTTA ATAGCGAAGG TTACTTCTTT GATGAAGCTT CCTCCAGCAA TGGCGAACTG GTGTTTAAAC GCTACGAGCA GCGTTAA
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Protein sequence | MLILISPAKT LDYQSPLPTT RYTLPELLDN SQQLIHEARK LTPPQISSLM RISDKLAGIN AARFHDWQPD FTSENARQAI LAFKGDVYTG LQAETFSEDD FDFAQQHLRM LSGLYGVLRP LDLMQPYRLE MGIRLENARG KDLYQFWGDI ITNKLNEALA AQGDNVVINL ASDEYFKSVK PKKLNAEIIK PVFLDEKNGK FKIISFYAKK ARGLMSRFII ENRLTKPEQL TGFNSEGYFF DEASSSNGEL VFKRYEQR
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