Gene EcSMS35_A0166 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_A0166 
Symbol 
ID6106537 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010488 
Strand
Start bp129751 
End bp130404 
Gene Length654 bp 
Protein Length217 aa 
Translation table11 
GC content52% 
IMG OID641614901 
ProductCAAX amino protease 
Protein accessionYP_001740042 
Protein GI170650867 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000162006 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones54 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTCAAA CACGTAATCA ATATCTGCAG TTTATGCTGG TTATGCTGGC TGCATGGGGC 
ATTAGTTGGG GAGCCAGATT TGTCATGGAG CAGGCCGTTC TGCTTTATGG ATCAGGAAAA
AACTATTTGT TCTTCAGTCA TGGTACTGTT CTGATGTACC TGCTGTGTGT TTTCCTGGTA
TACCGCCGTT GGATAGCTCC GCTACCGGTC GTTGGTCAGC TGCGCAACGT TGGCGTACCG
TGGCTGGTCG GTGCGATGGC CGTGGTGTAT GTCGGTGTAT TTCTGCTCGG TAAGGCGCTG
GCTCTGCCTG CTGAGCCATT TATGACGAAA CTTTTTGCCG ATAAGTCCAT ACCTGACGTG
ATCCTGACGT TGCTGACCAT CTTTATCCTT GCCCCGTTGA ATGAGGAAAC GCTGTTCCGG
GGGATTATGC TGAACGTCTT CCGTTCACGG TACTGCTGGA CGATGTGGCT GGGGGCGCTG
ATAACGTCGT TGTTGTTCGT CGCCGCGCAC AGCCAGTATC AGAACCTGCT GACACTGGCA
GAACTGTTCC TGGTGGGGTT GATTACATCA GTGGCCAGGA TCAGAAGTGG TGGCCTGCTG
CTGCCGGTAT TGCTGCATAT GGAAGCAACC ACGCTGGGTT TACTGTTTGG TTGA
 
Protein sequence
MIQTRNQYLQ FMLVMLAAWG ISWGARFVME QAVLLYGSGK NYLFFSHGTV LMYLLCVFLV 
YRRWIAPLPV VGQLRNVGVP WLVGAMAVVY VGVFLLGKAL ALPAEPFMTK LFADKSIPDV
ILTLLTIFIL APLNEETLFR GIMLNVFRSR YCWTMWLGAL ITSLLFVAAH SQYQNLLTLA
ELFLVGLITS VARIRSGGLL LPVLLHMEAT TLGLLFG