| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_A0150 |
|---|
| Symbol | |
|---|
| ID | 6106524 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli SMS-3-5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010488 |
|---|
| Strand | + |
|---|
| Start bp | 118542 |
|---|
| End bp | 119474 |
|---|
| Gene Length | 933 bp |
|---|
| Protein Length | 310 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 641614889 |
|---|
| Product | Tn1721 transposase |
|---|
| Protein accession | YP_001740030 |
|---|
| Protein GI | 170650893 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG4644] Transposase and inactivated derivatives, TnpA family |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 43 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 38 |
|---|
| Fosmid unclonability p-value | 0.751061 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGTTCAT GTGCAGCTCC ATCAGCAAAA GGGGATGATA AGTTTATCAC CACCGACTAT
TTGCAACAGT GCCAGCCGGG ACGGCTGTTC TATACCCATA TCTCCGACCA GTACGCGCCG
TTCAGCACCC GCGTGGTGAA TGTCGGCGTC CGCGATTCCA CCTATGTGCT CGACGGCCTG
CTGTACCACG AGTCCGACCT GCGGATCGAG GAGCACTACA CCGACACGGC CGGCTTCACC
GATCACGTCT TTGCCCTGAT GCACCTGCTA GGCTTCCGCT TCGCGCCGCG CATCCGCGAC
CTCGGCGAAA CCAAGCTGTA CGTGCCGCAG GGCGTGCAAG CCTACCCGAC GTTGCGCCCG
CTGATCGGCG GCACCCTGAA CATCAAGCAC GTGCGTGCCC ACTGGGACGA CATCCTGCGC
CTGGCCAGCT CGATCAAGCA GGGCACCGTC ACCGCCTCGC TGATGCTGCG CAAGCTCGGC
AGCTACCCGC GCCAGAACGG ACTGGCCGTG GCCCTGCGCG AGCTGGGCCG GATCGAGCGC
ACGCTGTTCA TCCTGGACTG GCTGCAAAGT GTTGAACTGC GCCGCCGCGT GCATGCCGGC
CTGAACAAAG GTGAGGCGCG CAACTCGCTG GCCAGGGCGG TGTTCTTCAA CCGCCTTGGG
GAAATCAGGG ATCGGAGCTT CGAGCAGCAG CGCTACCGGG CCAGCGGCCT CAACCTGGTG
ACGGCGGCTA TCGTGCTGTG GAACACGGTG TACCTGGAAC GCGCCACCCA GGGGTTGGTC
GAGGCCGGCA AGCCGGTGGA CGGCGAGCTG CTGCAATTCC TGTCGCCGCT GGGCTGGGAG
CACATCAACC TAACCGGCGA TTACGTCTGG CGGCAGAGCC GCAGACTGGA AGACGGGAAG
TTTCGGCCCT TACGGATGCC CGGAAAACCT TAG
|
|---|
| Protein sequence | MGSCAAPSAK GDDKFITTDY LQQCQPGRLF YTHISDQYAP FSTRVVNVGV RDSTYVLDGL
LYHESDLRIE EHYTDTAGFT DHVFALMHLL GFRFAPRIRD LGETKLYVPQ GVQAYPTLRP
LIGGTLNIKH VRAHWDDILR LASSIKQGTV TASLMLRKLG SYPRQNGLAV ALRELGRIER
TLFILDWLQS VELRRRVHAG LNKGEARNSL ARAVFFNRLG EIRDRSFEQQ RYRASGLNLV
TAAIVLWNTV YLERATQGLV EAGKPVDGEL LQFLSPLGWE HINLTGDYVW RQSRRLEDGK
FRPLRMPGKP
|
|---|
| |