Gene EcSMS35_A0138 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_A0138 
Symbol 
ID6106568 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010488 
Strand
Start bp107266 
End bp108165 
Gene Length900 bp 
Protein Length299 aa 
Translation table11 
GC content47% 
IMG OID641614877 
Producthypothetical protein 
Protein accessionYP_001740018 
Protein GI170650835 
COG category[K] Transcription 
COG ID[COG4271] Predicted nucleotide-binding protein containing TIR -like domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAATTG ATATCTTTCA GTCACTTAAA AATTGCGTAT TCGACCTTCA GCGCGCTGAC 
GTTCAGAACT ATCAGCAACC TCTTAAGCAA TTGGCCCGGC TCTTGAACTC AGAGAATCTG
CAGTCAGTTA ATGCACATCT GACCCGCAAT GTTGAACTTG ATACCTTTCT GGCCAGGAGT
GAAGATACTG AATCCAGCAT GGCTGGTTCC GCTGTTCTAC AGTGGCCTGA TGAGCCCGCT
GATATTTTGG GCCTGAAGTT GCTGCTGATC GAGAAAATGG CAGACGATAA CAATTTTTCC
TTTAATTTCT GTCATACATT TTTCTATGAT CGAAACATTA TTGAATCCAT TCGAAAATTC
ACGTCGTCAT TAGTTGCCCC GTTCGTGCGC GATTACCAGT TGTATGTGGA AAACCAACAC
GATCCTGAGC CTGCAGTGTT TCGGCCGGTT TCCCGAAAAA TTTTTATTGT TCATGGCCAT
GATAATGATG CCCTTCAGTC TGTTGCCCGT TTTATATCCC GGATAGGTCT TGAGGAAATC
ATTCTTTCAG AACGTCCTGA CGGCTCCAGG ACGATTATCG AGAAATTTGA AGCAGAGTCA
GGGGATGTCA GTTTTGCCAT CGTGCTGATG ACGCCCGACG ATAGCGGCAG TGCTCTGGCA
TCTGAAAGCA CACGTCTCCG CGCACGCCAG AATGTCCTGT ATGAGCTCGG ATATTTCGCC
GGGAAGCTTG GACGCGGGAA AGTACTTGTA CTCAGGAAGG GAGATATCGA AATCCCTTCA
GATCTTGCCG GGGTTCTCTA TACCGAGCTT GATGAGCATG GTGGATGGAA ACGCAAACTG
CTGAGTGAGC TTGCGTATGC CGGTGTTCCT TTTGACAAGG ATAAAGCATT AAGCGCCTGA
 
Protein sequence
MAIDIFQSLK NCVFDLQRAD VQNYQQPLKQ LARLLNSENL QSVNAHLTRN VELDTFLARS 
EDTESSMAGS AVLQWPDEPA DILGLKLLLI EKMADDNNFS FNFCHTFFYD RNIIESIRKF
TSSLVAPFVR DYQLYVENQH DPEPAVFRPV SRKIFIVHGH DNDALQSVAR FISRIGLEEI
ILSERPDGSR TIIEKFEAES GDVSFAIVLM TPDDSGSALA SESTRLRARQ NVLYELGYFA
GKLGRGKVLV LRKGDIEIPS DLAGVLYTEL DEHGGWKRKL LSELAYAGVP FDKDKALSA