| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_A0134 |
|---|
| Symbol | |
|---|
| ID | 6106556 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli SMS-3-5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010488 |
|---|
| Strand | + |
|---|
| Start bp | 104134 |
|---|
| End bp | 104742 |
|---|
| Gene Length | 609 bp |
|---|
| Protein Length | 202 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 641614874 |
|---|
| Product | HAD family hydrolase |
|---|
| Protein accession | YP_001740015 |
|---|
| Protein GI | 170650782 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0560] Phosphoserine phosphatase |
|---|
| TIGRFAM ID | [TIGR01488] Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like
[TIGR01490] HAD-superfamily subfamily IB hydrolase, TIGR01490 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 36 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 45 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCTCTCG CACTCTTTGA CTTCGATGGC ACAATTACCA CTCGCGAGAC GATGCCGGAT
TTTGTGCGGC GGTCCGTGAG CCGACGTCGA CTGCTTGTGG GACAACTGCT TCTGGCGCCG
CTCGTGCTTG GGTATAAGAT TGGGATCTTG TCTGGCACCC TGATCCGTCG CGTCATCGTT
CGCTTCGCTT ACAGCGGCAT CCCGGCCTCG GTCCTGGAGG CCCAAGGTCG TGACTTCGCT
CAGAGCTACC TGCCCAATAC CCTCCGCGGC GAGGCAATGC AGCGCATCGC ATGGCACAAA
GCGCAGGGGC ACAAGGTTGT CGTTGTTTCC GGCGGACTTG AGGCTTACTT GGAGCCGTGG
TGCGACTCGC ACGGCGTTGA GCTCATCTGT TCTTCCTTGC AACAGTCGGA CGGAATCCTA
ACGGGCCGCT ATGAAGGGCG GCAGTGCGTC TTGACGGAGA AGGCTCGCTT GGTCCGTGAG
CGCTACGACC TGGCGACATA TCCGACCATC TACGCGTACG GAGACACGCC GGAGGACCTG
GATATGCTGG CCATTGCTAC TAAGCAGTAC TATCAGTGGC AAGAGGTTGG CGTCGCAGGT
GGGCGCTAA
|
|---|
| Protein sequence | MSLALFDFDG TITTRETMPD FVRRSVSRRR LLVGQLLLAP LVLGYKIGIL SGTLIRRVIV
RFAYSGIPAS VLEAQGRDFA QSYLPNTLRG EAMQRIAWHK AQGHKVVVVS GGLEAYLEPW
CDSHGVELIC SSLQQSDGIL TGRYEGRQCV LTEKARLVRE RYDLATYPTI YAYGDTPEDL
DMLAIATKQY YQWQEVGVAG GR
|
|---|
| |