Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcSMS35_A0125 |
Symbol | |
ID | 6106566 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli SMS-3-5 |
Kingdom | Bacteria |
Replicon accession | NC_010488 |
Strand | + |
Start bp | 96061 |
End bp | 97065 |
Gene Length | 1005 bp |
Protein Length | 334 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 641614866 |
Product | IS5075 transposase |
Protein accession | YP_001740007 |
Protein GI | 170650868 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3547] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 39 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 41 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAAAACA TTGCGCTTAT TGGTATCGAT CTGGGTAAGA ACTCTTTCCA TATTCATTGT CAGGATCATC GTGGGAAGGC CGTTTACCGT AAAAAATTCA CCCGACCAAA GCTAATCGAA TTTCTGGCGA CATGCCCGGC AACAACCATC GCGATGGAAG CCTGTGGCGG TTCTCACTTT ATGGCACGCA AGCTGGAAGA GTTAGGGCAT TTTCCAAAGC TGATATCACC GCAATTTGTC CGCCCATTCG TTAAAAGCAA CAAAAATGAC TTCGTTGATG CTGAAGCTAT CTGTGAAGCA GCATCACGTC CATCTATGCG TTTCGTGCAG CCCAGAACCG AATCTCAGCA GGCAATGCGA GCTCTGCATC GTGTCCGTGA ATCCCTGGTT CAGGATAAGG TGAAAACAAC TAATCAGATG CATGCTTTTC TGCTGGAATT TGGTATCAGC GTTCCGCGAG GTGCTGCCGT TATTAGTCGA CTGAGTACCC TTCTTGAGGA CAGTAGTTTG CCTCTTTATC TCAGCCAGTT ACTGCTGAAA TTACAACAGC ATTATCACTA TCTTGTTGAG CAGATTAAAG ATCTGGAATC TCAGTTGAAA CGAAAGTTGG ACGAAGATGA GGTTGGACAG CGCTTGCTGA GTATTCCCTG CGTTGGAACG CTGACTGCCA GTACTATTTC AACTGAGATT GGCGACGGGA AGCAGTACGC CAGCAGCCGT GACTTTGCGG CGGCAACAGG GCTGGTACCC CGACAGTACA GCACGGGAGG TCGGACGACA TTGTTAGGGA TTAGCAAGCG GGGCAACAAA AAGATCCGAA CTTTGTTGGT TCAGTGTGCC AGGGTATTCA TACAAAAACT GGAACACCAG TCTGGCAAGT TGGCCGACTG GGTCAGGGAG TTGTTGTGTC GGAAAAGCAA CTTTGTCGTC ACCTGTGCTC TGGCAAACAA GCTGGCCAGA ATAGCCTGGG CACTGACGGC GCGACAGCAA ACTTACGAAG CATAA
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Protein sequence | MENIALIGID LGKNSFHIHC QDHRGKAVYR KKFTRPKLIE FLATCPATTI AMEACGGSHF MARKLEELGH FPKLISPQFV RPFVKSNKND FVDAEAICEA ASRPSMRFVQ PRTESQQAMR ALHRVRESLV QDKVKTTNQM HAFLLEFGIS VPRGAAVISR LSTLLEDSSL PLYLSQLLLK LQQHYHYLVE QIKDLESQLK RKLDEDEVGQ RLLSIPCVGT LTASTISTEI GDGKQYASSR DFAAATGLVP RQYSTGGRTT LLGISKRGNK KIRTLLVQCA RVFIQKLEHQ SGKLADWVRE LLCRKSNFVV TCALANKLAR IAWALTARQQ TYEA
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