Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcSMS35_A0113 |
Symbol | resD |
ID | 6106534 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli SMS-3-5 |
Kingdom | Bacteria |
Replicon accession | NC_010488 |
Strand | - |
Start bp | 84261 |
End bp | 85037 |
Gene Length | 777 bp |
Protein Length | 258 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 641614855 |
Product | resolvase |
Protein accession | YP_001739996 |
Protein GI | 170650847 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG4974] Site-specific recombinase XerD |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 0.0189778 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGCTTTCCC TGCCTGGTTC TTTTTTAACG CCTCCGGCAA CATTACCTGT TGCCATTGAT TACCCGGCTG CGCTGGCACT ACGTCAGATG GCACTTGTGC AGGACGAATT ACCAAAATAT CTGTTGGCGC CGGAGATCAG CGCCCTGCTC CACTATGTAC CGGATCTGCA CCGCAAAATG TTGCTGGCCA CCCTGTGGAA CACGGGCGCA CGTATAAACG AAGCGCTGGC GCTGACGCGG GGAGATTTTT CTCTGGCGCC GCCATATCCG TTCGTACAGC TGGCCACGCT CAAACAACGG ACTGAAAAAG CGACCAGAAC GGCAGGCCGT GTCCCTGCTG GCAGTCAGGT GCATCGCCTG GTTCCCCTGT CCGATACACA ATACGTCAGC CAACTGCAGA TGATGGTGGC CACGCTGAAA ATCCCACTGG AGCGCAGAAA CAAACGAACC GGAAGAATGG AGAAGGCGCG CATCTGGGGA ATCACCGACC GCACAGTTCG CACCTGGCTG AATGAAGCTG TAGAGGCCGC TGCGGCCGAC GGCGTGACGT TCTCTGTTCC GGTTACCCCA CATACTTTCC GCCATTCCTA CGCGATGCAT ATGCTGTATG CTGGTATTCC GCTGAAGGTG CTGCAGAGCC TGATGGGGCA CAAGTCGATT AGTTCGACAG AGGTGTACAC GAAGGTGTTT GCGCTGGATG TGGCTGCACG GCACCGGGTG CAGTTTTCGA TTCCTGAGTC CGATGCTGTC ACAATGCTGA AAAACAGACA CGCATAA
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Protein sequence | MLSLPGSFLT PPATLPVAID YPAALALRQM ALVQDELPKY LLAPEISALL HYVPDLHRKM LLATLWNTGA RINEALALTR GDFSLAPPYP FVQLATLKQR TEKATRTAGR VPAGSQVHRL VPLSDTQYVS QLQMMVATLK IPLERRNKRT GRMEKARIWG ITDRTVRTWL NEAVEAAAAD GVTFSVPVTP HTFRHSYAMH MLYAGIPLKV LQSLMGHKSI SSTEVYTKVF ALDVAARHRV QFSIPESDAV TMLKNRHA
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