Gene EcSMS35_A0108 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_A0108 
Symbol 
ID6106523 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010488 
Strand
Start bp80919 
End bp81329 
Gene Length411 bp 
Protein Length136 aa 
Translation table11 
GC content51% 
IMG OID641614851 
Productinsertion sequence 2 OrfA protein 
Protein accessionYP_001739992 
Protein GI170650863 
COG category[L] Replication, recombination and repair 
COG ID[COG2963] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.0157365 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.00244119 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGATAGTCT TAATACTAGT TTTTAGACTA GTCATTGGAG AGCAGATGAT TGATGTCTTA 
GGACCGGAGA AACGCAGACG GCGTACTACA CAGGAAAAGA TCGCTATTGT TCAGCAGAGT
TTTGAACCGG GAATGACGGT CTCCCTTGTT GCCCGGCAAC ACGGTGTGGC AGCCAGCCAG
TTATTTCTCT GGCGCAAGCA ATACCAGGAG GGAAGTCTTA CTGCTGTGGC CGCAGGAGAG
CAGGTCGTTC CTGCCTCTGA ACTTGCTGCT GCCATGAAGC AGATTAAAGA ACTCCAGCGC
CTGCTCGGCA AAAAAACGAT GGAAAATGAA CTCCTTAAAG AAGCCGTTGA ATACGGGCGT
GCAAAAAAGT GGATAGCGCA CGCGCCCTTA TTGCCCGGGG ATGGGGAGTA A
 
Protein sequence
MIVLILVFRL VIGEQMIDVL GPEKRRRRTT QEKIAIVQQS FEPGMTVSLV ARQHGVAASQ 
LFLWRKQYQE GSLTAVAAGE QVVPASELAA AMKQIKELQR LLGKKTMENE LLKEAVEYGR
AKKWIAHAPL LPGDGE