Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcSMS35_A0108 |
Symbol | |
ID | 6106523 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli SMS-3-5 |
Kingdom | Bacteria |
Replicon accession | NC_010488 |
Strand | + |
Start bp | 80919 |
End bp | 81329 |
Gene Length | 411 bp |
Protein Length | 136 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 641614851 |
Product | insertion sequence 2 OrfA protein |
Protein accession | YP_001739992 |
Protein GI | 170650863 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2963] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.0157365 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.00244119 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGATAGTCT TAATACTAGT TTTTAGACTA GTCATTGGAG AGCAGATGAT TGATGTCTTA GGACCGGAGA AACGCAGACG GCGTACTACA CAGGAAAAGA TCGCTATTGT TCAGCAGAGT TTTGAACCGG GAATGACGGT CTCCCTTGTT GCCCGGCAAC ACGGTGTGGC AGCCAGCCAG TTATTTCTCT GGCGCAAGCA ATACCAGGAG GGAAGTCTTA CTGCTGTGGC CGCAGGAGAG CAGGTCGTTC CTGCCTCTGA ACTTGCTGCT GCCATGAAGC AGATTAAAGA ACTCCAGCGC CTGCTCGGCA AAAAAACGAT GGAAAATGAA CTCCTTAAAG AAGCCGTTGA ATACGGGCGT GCAAAAAAGT GGATAGCGCA CGCGCCCTTA TTGCCCGGGG ATGGGGAGTA A
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Protein sequence | MIVLILVFRL VIGEQMIDVL GPEKRRRRTT QEKIAIVQQS FEPGMTVSLV ARQHGVAASQ LFLWRKQYQE GSLTAVAAGE QVVPASELAA AMKQIKELQR LLGKKTMENE LLKEAVEYGR AKKWIAHAPL LPGDGE
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