| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_A0102 |
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| Symbol | |
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| ID | 6106472 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010488 |
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| Strand | + |
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| Start bp | 77170 |
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| End bp | 78057 |
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| Gene Length | 888 bp |
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| Protein Length | 295 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 641614847 |
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| Product | IS629 transposase orfB |
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| Protein accession | YP_001739988 |
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| Protein GI | 170650767 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG2801] Transposase and inactivated derivatives |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.0471323 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.000157883 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCCACTGC TGGATAAGCT GCGTGAGCAG TACGGGGTCG GACCGCTATG CAGCGAACTG
CATATTGCCC CGTCAACGTA TTACCACTGT CAGCAACAGC GACATCATCC GGATAAACGC
AGTGCCCGTG CGCAGCGCGA TGACTGGCTG AAGAAAGAGA TACAGCGCGT ATACGATGAA
AATCACAAGG TATACGGTGT GCGTAAAGTC TGGCGTCAGT TGTTACGGGA AGGTATCAGA
GTGGCCAGAT GCACTGTGGC ACGTCTCATG GCGGTTATGG GACTTGCCGG TGTTCTCCGT
GGTAAAAAGG TCCGTACGAC CATCAGCCGG AAAGCCGTTG TCGCAGGCGA CCGCGTAAAC
CGTCAGTTCG TGGCAGAACG TCCTGACCAG TTGTGGGTGG CTGATTCTAC TTACGTCAGC
ACATGGCAGG GGGTCGTCTA TGTGGCGTTC ATCATTGATG TGTTTGCCGG ATACATCGTG
GGGTGGCGGG TCTCATCGTC TATGGAAACG ACATTTGTGC TGGATGCTCT GGAGCAGGCG
TTATGGGCCC GTCGACCGTC CGGCACAGTC CATCACAGTG ATAAAGGTTC TCAGTATGTA
TCGCTGGCCT ACACACAGCG GCTTAAGGAA GCCGGATTAC TGGCATCAAC AGGAAGTACA
GGCGACTCGT ATGACAACGC GATGGCGGAG AGCATCAATG GCCTTTACAA AGCGGAGGTA
ATACACCGTA AGAGCTGGAA AAACCGTGCA GAAGTGGAAC TGGCCACACT CACGTGGGTG
GACTGGTATA ACAATCGACG ATTGCTGGAA AGGCTGGGCC ATACTCCTCC GGCAGAAGCA
GAAAAAGCTT ATTATGCTTC CATCGGAAAC GATGATCTGG CAGCCTGA
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| Protein sequence | MPLLDKLREQ YGVGPLCSEL HIAPSTYYHC QQQRHHPDKR SARAQRDDWL KKEIQRVYDE
NHKVYGVRKV WRQLLREGIR VARCTVARLM AVMGLAGVLR GKKVRTTISR KAVVAGDRVN
RQFVAERPDQ LWVADSTYVS TWQGVVYVAF IIDVFAGYIV GWRVSSSMET TFVLDALEQA
LWARRPSGTV HHSDKGSQYV SLAYTQRLKE AGLLASTGST GDSYDNAMAE SINGLYKAEV
IHRKSWKNRA EVELATLTWV DWYNNRRLLE RLGHTPPAEA EKAYYASIGN DDLAA
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