Gene EcSMS35_A0101 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_A0101 
Symbol 
ID6106515 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010488 
Strand
Start bp76844 
End bp77170 
Gene Length327 bp 
Protein Length108 aa 
Translation table11 
GC content54% 
IMG OID641614846 
ProductIS629 transposase orfA 
Protein accessionYP_001739987 
Protein GI170650823 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.0789962 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.0000515378 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACTAAAA ATACTCGTTT TTCCCCCGAA GTCCGTCAGA GGGCGATTCG TATGGTTCTG 
GAAAGTCAGG GCGAATATGA CTCACAGTGG GCGGCAATTT GTTCCATTGC CCCAAAGATT
GGCTGTACAC CGGAGACTCT GCGTGTCTGG GTACGCCAGC ATGAGCGGGA TACCGGAGGC
GGTGATGGCG GGCTCACCAC CGCTGAACGT CAGCGTCTGA AAGAGCTGGA ACGTGAAAAT
CGTGAACTGC GCCGCAGTAA CGATATCCTT CGCCAGGCTT CCGCTTATTT TGCGAAGGCG
GAGTTCGACC GCCTCTGGAA AAAATGA
 
Protein sequence
MTKNTRFSPE VRQRAIRMVL ESQGEYDSQW AAICSIAPKI GCTPETLRVW VRQHERDTGG 
GDGGLTTAER QRLKELEREN RELRRSNDIL RQASAYFAKA EFDRLWKK