Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcSMS35_A0100 |
Symbol | |
ID | 6106626 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli SMS-3-5 |
Kingdom | Bacteria |
Replicon accession | NC_010488 |
Strand | + |
Start bp | 75333 |
End bp | 75722 |
Gene Length | 390 bp |
Protein Length | 129 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 641614845 |
Product | hypothetical protein |
Protein accession | YP_001739986 |
Protein GI | 170650896 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.0202792 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.0000236934 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGTGGCCAC ATGTCGCTTT ATTTATTCCC TTTTATGTCA GAATATCAGG GGAGTCAGTC AAACCCGGTA TGATTACTGC CCCGGTCATC CATGTTCCAG AAAATATCAG GGCATACAGG GCGCTGGTAA CTGCGAATAA GGCCCTGGTC GGACACTTTA TGCCGGGAAC GTCTGTAACG TGGAAACCGG TACCTTCTTC CTGGGGTTAT TTTGTTAACT CTTATCTAAA GGGAGACAAA ATGGCCAAAT CCTGCGATTA TGAAGCAATC AGGGTCTTTA TTAGCGTTAA TGTCGGCAAA TATACCAATA ACGCCATTAC AGTTAATTAT TCAGATAGCG TTTGTGCGAC AAGACATTAC CATTCGACGA AAATAAACTC AGGTGGTTGA
|
Protein sequence | MWPHVALFIP FYVRISGESV KPGMITAPVI HVPENIRAYR ALVTANKALV GHFMPGTSVT WKPVPSSWGY FVNSYLKGDK MAKSCDYEAI RVFISVNVGK YTNNAITVNY SDSVCATRHY HSTKINSGG
|
| |