Gene EcSMS35_A0100 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_A0100 
Symbol 
ID6106626 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010488 
Strand
Start bp75333 
End bp75722 
Gene Length390 bp 
Protein Length129 aa 
Translation table11 
GC content44% 
IMG OID641614845 
Producthypothetical protein 
Protein accessionYP_001739986 
Protein GI170650896 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.0202792 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.0000236934 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTGGCCAC ATGTCGCTTT ATTTATTCCC TTTTATGTCA GAATATCAGG GGAGTCAGTC 
AAACCCGGTA TGATTACTGC CCCGGTCATC CATGTTCCAG AAAATATCAG GGCATACAGG
GCGCTGGTAA CTGCGAATAA GGCCCTGGTC GGACACTTTA TGCCGGGAAC GTCTGTAACG
TGGAAACCGG TACCTTCTTC CTGGGGTTAT TTTGTTAACT CTTATCTAAA GGGAGACAAA
ATGGCCAAAT CCTGCGATTA TGAAGCAATC AGGGTCTTTA TTAGCGTTAA TGTCGGCAAA
TATACCAATA ACGCCATTAC AGTTAATTAT TCAGATAGCG TTTGTGCGAC AAGACATTAC
CATTCGACGA AAATAAACTC AGGTGGTTGA
 
Protein sequence
MWPHVALFIP FYVRISGESV KPGMITAPVI HVPENIRAYR ALVTANKALV GHFMPGTSVT 
WKPVPSSWGY FVNSYLKGDK MAKSCDYEAI RVFISVNVGK YTNNAITVNY SDSVCATRHY
HSTKINSGG