| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_A0098 |
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| Symbol | hlyF |
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| ID | 6106558 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010488 |
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| Strand | - |
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| Start bp | 72734 |
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| End bp | 73843 |
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| Gene Length | 1110 bp |
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| Protein Length | 369 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 641614843 |
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| Product | hemolysin F |
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| Protein accession | YP_001739984 |
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| Protein GI | 170650913 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3320] Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.0392616 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.000000811123 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAATTAT TATTACTTAC AGGTGCAACA GGATTTCTTG GTGGCGCGGT CCTGGATAAG
CTGCTGGATA ACTGTAATAA TATAAATTTG CTACTTTTAG TACGAGCACC TACTCCACAA
GCGGGACTGG AAAGAATTAA AGAAAATATG CGTAAATTTA ATGTTTGTGA GGAAAGGTTG
CATGCATTAA CTAATGATAA CATCTTGCCT GGGGATCTAA ATAATCCGGA AGCCTTTCTC
ATGGATCCTC GTCTTGATGA AGTCACTCAT GTTATAAACT GTGCGGCTAT AGCTTCTTTT
GGTAATAATC CTTTTATATG GAATGTGAAT GTTACAGGTA CACTTGCTTT TGCAAGAAGA
ATGGCAAAAG TGGCAGGACT GAAACGCTTC CTTCATGTTG GTACTGCTAT GTCTTGTACA
CCTCATACGG GGTCGCTAGT TAAGGAAGAG TCTGCTTCAT CAGAAACAGG TGAACATTTA
GTGGAGTATA CGCATTCAAA AGCAACAATA GAATATCTGA TGCGTAAGCA GTGTCCTGAT
TTACCTTTGT TGGTTGCCCG ACCATCAATT ATTGTTGGCC ACAGTCGTTT AGGGTGCTTA
CCTTCAACCA GTATTTTCTG GGTATTCAGA ATGGGGTTAA TGTTGCAAAA ATTTATGTGC
TCTCTGGATG ATAAAATAGA TGTTATCCCT GTAGATTATT GTGCTGATGC ATTGCTAATG
TTGCTTGAAA GCTCGTTAAT TAATGGTGAG ATTGTTCATA TATCAGCAGG TAAAGAAAGT
AGTGTGACGT TCTCTGCTAT TGACGAAGCT GTAGCCCGTG CTTTGAACTG TGATCCTGTT
GGAGACAGAT ATACTAAAGT CAGTTATGAC ATACTGGCAA TGAGCCGTCA TGATTTTAAA
AATATTTTTG GTCCCTGTAA CGAACGCCTT ATGTTAAAAG CCATTCGTTT ATATGGAGCG
TTCAGTATGC TCAATGTTTG TTTCAGTAAC GACAAGCTAC TGAGTATCGG AATGCCTAAA
CCGCCAAAGT TTACTGATTA TATTAAATAC TGTATAGAAA CGACAAAACA CCTTTCAATT
CAACAACAAA TGGAAGTTGA TTTTAAATAA
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| Protein sequence | MKLLLLTGAT GFLGGAVLDK LLDNCNNINL LLLVRAPTPQ AGLERIKENM RKFNVCEERL
HALTNDNILP GDLNNPEAFL MDPRLDEVTH VINCAAIASF GNNPFIWNVN VTGTLAFARR
MAKVAGLKRF LHVGTAMSCT PHTGSLVKEE SASSETGEHL VEYTHSKATI EYLMRKQCPD
LPLLVARPSI IVGHSRLGCL PSTSIFWVFR MGLMLQKFMC SLDDKIDVIP VDYCADALLM
LLESSLINGE IVHISAGKES SVTFSAIDEA VARALNCDPV GDRYTKVSYD ILAMSRHDFK
NIFGPCNERL MLKAIRLYGA FSMLNVCFSN DKLLSIGMPK PPKFTDYIKY CIETTKHLSI
QQQMEVDFK
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