| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_A0092 |
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| Symbol | |
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| ID | 6106554 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010488 |
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| Strand | + |
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| Start bp | 67787 |
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| End bp | 68533 |
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| Gene Length | 747 bp |
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| Protein Length | 248 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 641614837 |
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| Product | integrase core subunit |
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| Protein accession | YP_001739978 |
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| Protein GI | 170650815 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG2801] Transposase and inactivated derivatives |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 0.322057 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.00000000362054 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | TTGTGCAGCG AAATACGCCG GGCGTGGAAC CAAAGTCGGG GCTCTGCGGG CGCGCGCACT
CTGGCTGAAA TGCTGACTCA AAACGGCGTC CCGATGAGCC GTTACCGTGC CGGACGTCTG
ATGAAATATC TGAACCTGAG CAGTTGTCAG CCCGGAAAAC ATCAGTATAA AAATGCCCGT
CAGGAGCATA CCAGCCTGCC GAATCTGCTT GAGCGTCAGT TCGCAGTACC GGAGCCAGAC
CGGGTATGGT GTGGAGATAT TACGTATCTC TGGGCAGGAA ATCGCTGGTG CTATCTGGCG
GTTGTTATGG ATCTTTTTGC CCGCAGGGTT ATCGGCTGGA GTCTGTCAGC GCATGCCGAT
ACCGCACTGA TAAGCAGTGC CCTGCGGATG GCCTATGAGA CGCGTGGCCA ACCCCGGGAT
GTCGTGTTCC ATAGCGACCA GGGAAGCCAG TATACAGGCC TTAAATATCA ACAACTTCTC
TGGCGTTGCA GAATAAATCA AAGCGTCAGT CGGCGGGGAA ACTGCTGGGA TAACAGCCCC
ATGGAACGCT TCTTCCGCAG TCTGAAAACA GAATGGGTGC CAACGAATGG TTACGCAGGC
AAGGACGAGG CCCGGCAGCA AATTAATGAT TACATATTGA ACTACTACAA CAGCGTCAGA
CCTCACCATT ATAACGGTGG GCTGACGCCG GAAGAGTCAG AGAACAGATA CCATTTTTAC
TGTAAAACCG TGGCCAATAT TACTTGA
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| Protein sequence | MCSEIRRAWN QSRGSAGART LAEMLTQNGV PMSRYRAGRL MKYLNLSSCQ PGKHQYKNAR
QEHTSLPNLL ERQFAVPEPD RVWCGDITYL WAGNRWCYLA VVMDLFARRV IGWSLSAHAD
TALISSALRM AYETRGQPRD VVFHSDQGSQ YTGLKYQQLL WRCRINQSVS RRGNCWDNSP
MERFFRSLKT EWVPTNGYAG KDEARQQIND YILNYYNSVR PHHYNGGLTP EESENRYHFY
CKTVANIT
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