| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_A0085 |
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| Symbol | |
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| ID | 6106468 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010488 |
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| Strand | + |
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| Start bp | 65162 |
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| End bp | 65374 |
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| Gene Length | 213 bp |
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| Protein Length | 70 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 641614832 |
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| Product | IS1 transposase orfA |
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| Protein accession | YP_001739973 |
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| Protein GI | 170650764 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 0.162991 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.0000000467836 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | GTGTATGATG GTGTTTTTGA GGTGCTCCAG TGGCTTCTGT TTCTATCAGC TGTCCCTCCT
GTTCAGCTAC TGACGGGGTG GTGCGTAACG GCAAAAGCAC CGCCGGACAT CAGCGCTATC
TCTGCTCTCA CTGCCGTAAA ACATGGCAAC TGCAGTTCAC TTACACCGCT TCTCAACCCG
GTACGCACCA GAAAATCATT GATATGGCCA TGA
|
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| Protein sequence | MYDGVFEVLQ WLLFLSAVPP VQLLTGWCVT AKAPPDISAI SALTAVKHGN CSSLTPLLNP
VRTRKSLIWP
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