Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcSMS35_A0083 |
Symbol | sitB_1 |
ID | 6106581 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli SMS-3-5 |
Kingdom | Bacteria |
Replicon accession | NC_010488 |
Strand | - |
Start bp | 63094 |
End bp | 63921 |
Gene Length | 828 bp |
Protein Length | 275 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 641614830 |
Product | iron/manganese transport system membrane protein SitB |
Protein accession | YP_001739971 |
Protein GI | 170650876 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1121] ABC-type Mn/Zn transport systems, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 0.921207 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.000000822462 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGATGCAAT CTGCAGGCAT TGTCGTTAAT GATGTTACTG TCACCTGGCG TAACGGGCAC ACAGCACTGC GCGATGCATC CTTCACAGTA CCAGGCGGAT CTATTGCCGC TCTGGTTGGG GTAAACGGTT CCGGAAAATC GACGTTGTTT AAAGCGATTA TGGGATTTGT GCGTCTGACC AGCGGGAAGA TATCTGTTCT GGGTATTCCC ACACGACAGG CGCTACAGAA AAACCTGGTT GCCTACGTCC CTCAGTCAGA AGAGGTTGAC TGGTCATTTC CTGTACTGGT GGAAGATGTG GTGATGATGG GCCGCTATGG GCATATGGGT ATGTTGCGTA TCGCCAAAAA GAGGGATCGT CAGATTGTCA CCGATGCGCT GGAACGTGTC GATATGGTGG ATTTTCGCCA TCGACAAATC GGCGAGCTTT CCGGTGGACA AAAGAAACGC GTCTTTCTGG CGAGAGCGAT TGCACAGCAG GGTGATGTGA TCCTGCTGGA TGAACCTTTT ACCGGCGTTG ATGTGAAAAC CGAAGCGAAA ATCATCAGCC TGTTGAGGGA GTTACGCGCG GAAGGCAAAA CGATGCTTGT CTCAACGCAC AATCTCGGAT CCGTCACGAC ATTTTGCGAT TATACGGTCA TGGTCAAAGG CACCGTCCTG GCAAGCGGGC CGACAGACAC CACTTTTACA GCCGAGAACC TGGAGCTGGC TTTTAGCGGC GTACTGCGCC ATGTCACACT TAACGGCTCG GAAGAAAGCA TTATTACTGA CGATGAACGC CCTTTTGTGG CACATCGACC GTCAGCGGTG CAGAGGGAAG AAAGATGA
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Protein sequence | MMQSAGIVVN DVTVTWRNGH TALRDASFTV PGGSIAALVG VNGSGKSTLF KAIMGFVRLT SGKISVLGIP TRQALQKNLV AYVPQSEEVD WSFPVLVEDV VMMGRYGHMG MLRIAKKRDR QIVTDALERV DMVDFRHRQI GELSGGQKKR VFLARAIAQQ GDVILLDEPF TGVDVKTEAK IISLLRELRA EGKTMLVSTH NLGSVTTFCD YTVMVKGTVL ASGPTDTTFT AENLELAFSG VLRHVTLNGS EESIITDDER PFVAHRPSAV QREER
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