| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_A0082 |
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| Symbol | sitC_1 |
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| ID | 6106461 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010488 |
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| Strand | - |
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| Start bp | 62240 |
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| End bp | 63097 |
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| Gene Length | 858 bp |
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| Protein Length | 285 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 641614829 |
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| Product | iron/manganese transport system membrane protein SitC |
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| Protein accession | YP_001739970 |
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| Protein GI | 170650819 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1108] ABC-type Mn2+/Zn2+ transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.000000869047 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAACGCGC TACTGGAACC CTTCAGCTAT GAATATATGC TCAATGCGAT GTGGGTCTCG
GCGATGGTCG GCGGTCTCTG CGCTTTCCTG TCATGCTATC TGATGCTAAA AGGCTGGTCG
CTGATTGGCG ATGCGCTGTC GCACTCTATT GTCCCGGGTG TTGCGGGGGC ATATATGCTG
GGGCTTCCGT TTTCTCTGGG AGCCTTCTTT TCCGGCGGAC TGGCAGCGGG CAGCATGCTG
TTTCTTAACC AACTCACTCG CTTAAAAGAA GATGCCATCA TCGGCCTGAT CTTCTCGTCC
TTTTTTGGCC TGGGGCTGTT TATGGTGTCA TTGAACCCGA CATCCGTGAA CATTCAGACC
ATCGTCCTGG GCAATATTCT GGCAATCGAT CCGGCGGATA TCCTGCAACT CACTATCATT
GGCATTCTCT CGATCATCGT GCTTTTTTTC AAATGGAAAG ATCTTATGGT GACCTTTTTC
GACGAGAATC ACGCCCGTGC TATTGGATTG CATCCGGGCA GATTAAAAAT CCTCTTCTTC
ACCCTGCTGT CGGTTTCGAC CGTTGCGGCG CTGCAAACGG TTGGTGCCTT TCTGGTGATC
TGTCTGGTGG TGACTCCCGG TGCAACAGCA TGGTTGTTAA CCGATCGTTT TCCCCGCCTG
CTCATGATTG CTGTAACTAT TGGCAGTGTG ACCAGTTTCC TCGGCGCGTG GGTCAGTTAC
TTTCTGGACG GCGCGACAGG TGGAATCATC GTGGTGGCGC AGACACTGCT GTTTCTTTTA
GCATTTGTCT TTGCGCCCAC CCATGGGCTT TTGGCAAATC GTCGGCGTGC GCATAAAGCG
CTGGAGGATC GCTCATGA
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| Protein sequence | MNALLEPFSY EYMLNAMWVS AMVGGLCAFL SCYLMLKGWS LIGDALSHSI VPGVAGAYML
GLPFSLGAFF SGGLAAGSML FLNQLTRLKE DAIIGLIFSS FFGLGLFMVS LNPTSVNIQT
IVLGNILAID PADILQLTII GILSIIVLFF KWKDLMVTFF DENHARAIGL HPGRLKILFF
TLLSVSTVAA LQTVGAFLVI CLVVTPGATA WLLTDRFPRL LMIAVTIGSV TSFLGAWVSY
FLDGATGGII VVAQTLLFLL AFVFAPTHGL LANRRRAHKA LEDRS
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