Gene EcSMS35_A0078 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_A0078 
Symbol 
ID6106488 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010488 
Strand
Start bp59638 
End bp60102 
Gene Length465 bp 
Protein Length154 aa 
Translation table11 
GC content39% 
IMG OID641614825 
Producthypothetical protein 
Protein accessionYP_001739966 
Protein GI170650861 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value0.772628 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.00000571982 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGGATGTGG CTGATAATGC CGTAAAAATA GGTTTGGGGT CGTTGCTGAC TATTTTAGGG 
GGGTGGCTGA CTCTTAAGCT AACACAAAAG CACGAATTAA AAAAAGAAGC GGCAGTACAG
GGATTAAAAG ATAAAGAAAT AAAAACCAAA CGATATGTGG AATTTCTGGC CTTGTCTCAA
TCTCTCATGC AAAAATATTT ATATGAGCAG TGTGAAGCAA ATAACGATGA TTATCTTGCC
TATCTTCGCA TACATAATGA GATAACGATC ACGTCAGGTT TAGCCATAAG GAAAGCAGCA
TTTAAACTCC AGTTTGATGT TTCTACTTTC ATTTTCTACA ACAAAATACA CGACACAGAA
CTCATTAATG CACTGAGGGA TAAGGCTAGA AATTCTGTTT CCATGTTTCA GGCCATTGTG
AATGAGGAAA TCTGCAACGG AAAGTTTGGC ACAGCAAGCC AGTAG
 
Protein sequence
MDVADNAVKI GLGSLLTILG GWLTLKLTQK HELKKEAAVQ GLKDKEIKTK RYVEFLALSQ 
SLMQKYLYEQ CEANNDDYLA YLRIHNEITI TSGLAIRKAA FKLQFDVSTF IFYNKIHDTE
LINALRDKAR NSVSMFQAIV NEEICNGKFG TASQ