| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_A0073 |
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| Symbol | sopA |
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| ID | 6106519 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010488 |
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| Strand | - |
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| Start bp | 54635 |
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| End bp | 55810 |
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| Gene Length | 1176 bp |
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| Protein Length | 391 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641614820 |
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| Product | plasmid-partitioning protein SopA |
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| Protein accession | YP_001739961 |
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| Protein GI | 170650895 |
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| COG category | [D] Cell cycle control, cell division, chromosome partitioning |
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| COG ID | [COG1192] ATPases involved in chromosome partitioning |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 44 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.0000728582 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTTCAGAA TGAGACTCAT GGAAACACTT AACCAGTGCA TAAACGCTGG TCATGAAATG
ACGAAGGCTA TCGCCATTGC ACAGTTTAAT GATGACAGCC CGGAAGCGAG GAAAATCACC
CGACGCTGGA GAATAGGTGA AGCAGCGGAT TTAGTTGGAG TATCTTCTCA GGCTATCAGG
GATGCCGAGA AAGCAGGCCG GCTACCGCAC CCGGATATGG AAATACGAGG ACGGGTTGAG
CAACGTGTTG GTTATACAAT TGAACAAATT AATCATATGC GTGACGTGTT TGGTACGAGA
CTACGACGTG CTGAAGACGT ATTTCCGCCG GTGATTGGAG TTGCTGCTCA TAAAGGGGGC
GTTTACAAAA CCTCTGTTTC TGTTCATCTT GCTCAGGATC TGGCTCTGAA GGGATTACGT
GTTCTGCTCG TGGAAGGTAA CGACCCCCAG GGAACAGCAT CGATGTATCA CGGCTGGGTG
CCAGATCTTC ATATTCATGC AGAGGATACT CTCCTTCCCT TCTATCTTGG GGAAAAGGAC
GATGTCACTT ATGCAATAAA GCCTACTTGC TGGCCTGGGC TTGACATTAT TCCTTCCTGT
TTGGCTCTGC ACCGCATTGA AACTGAGCTA ATGGGCAAAT TTGATGAAGG TAAATTGCCC
ACCGATCCAC ACCTGATGCT CCGACTGGCC ATTGAAACCG TCGCTCATGA CTATGATGTC
ATTGTCATTG ACAGCGCGCC TAACCTAGGT ATCGGCACGA TTAATGTTGT ATGTGCTGCT
GATGTGTTGA TTGTCCCCAC GCCTGCTGAG TTGTTCGACT ACACTTCCGC TCTGCAGTTT
TTCGATATGC TTCGTGATCT GCTCAAAAAC GTAGATCTTA AAGGATTCGA GCCTGATGTA
CGTATTTTGC TTACCAAATA CAGTAATAGT AATGGTTCTC AGTCCCCGTG GATGGAGGAG
CAAATTCGGG ACGCCTGGGG AAGCATGGTC CTAAAAAATG TTGTGCGTGA AACGGATGAA
GTTGGTAAAG GTCAGATCCG GATGAGAACT GTTTTTGAAC AGGCTATTGA TCAACGCTCT
TCAACAGGTG CCTGGAGAAA TGCCCTTTCT ATTTGGGAAC CTGTCTGCAA TGAAATTTTC
GATCGTTTGA TTAAACCACG CTGGGAGATT AGATAA
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| Protein sequence | MFRMRLMETL NQCINAGHEM TKAIAIAQFN DDSPEARKIT RRWRIGEAAD LVGVSSQAIR
DAEKAGRLPH PDMEIRGRVE QRVGYTIEQI NHMRDVFGTR LRRAEDVFPP VIGVAAHKGG
VYKTSVSVHL AQDLALKGLR VLLVEGNDPQ GTASMYHGWV PDLHIHAEDT LLPFYLGEKD
DVTYAIKPTC WPGLDIIPSC LALHRIETEL MGKFDEGKLP TDPHLMLRLA IETVAHDYDV
IVIDSAPNLG IGTINVVCAA DVLIVPTPAE LFDYTSALQF FDMLRDLLKN VDLKGFEPDV
RILLTKYSNS NGSQSPWMEE QIRDAWGSMV LKNVVRETDE VGKGQIRMRT VFEQAIDQRS
STGAWRNALS IWEPVCNEIF DRLIKPRWEI R
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