Gene EcSMS35_A0071 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_A0071 
Symbol 
ID6106458 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010488 
Strand
Start bp52623 
End bp53036 
Gene Length414 bp 
Protein Length137 aa 
Translation table11 
GC content57% 
IMG OID641614818 
Producthypothetical protein 
Protein accessionYP_001739959 
Protein GI170650858 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones46 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.000445058 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCCTGCCA GTGAGTGTGT GGAACATATC TTGGCCAGTG GCTTGGTCTG TGATGTGCTG 
CGTATACCGG GTGAACCGCC CCGCCGCTTG TTTGACCGCT ATATTCTGCG GGAGTTTTCT
TGGAGGCACG GGATGAAATC CGCAGCATGG CGGATGCCCT GGCAAAAATC CGGAAATGAT
GACGATGGCG GGGAAAATCC CCGCCTTTTT CCTGCCGGTC CCCGGACAGA GCACAAAGGA
AGTCGCCGCC GGCTCCGCTT TACCCGGCCA TGCGGAGCAT GGCCTTGTGG GGGTTCAGTT
ATGTGGACGT CGAGTCGTGT GCGGGCTGTG CCGTGCCTCC ATCTTAGCCG GGCTGGCGTT
GATGCAAGCA ACTGTCTTAA TGGGAGGCGG TTATCTGAAA AAAGTACGGG ATAA
 
Protein sequence
MPASECVEHI LASGLVCDVL RIPGEPPRRL FDRYILREFS WRHGMKSAAW RMPWQKSGND 
DDGGENPRLF PAGPRTEHKG SRRRLRFTRP CGAWPCGGSV MWTSSRVRAV PCLHLSRAGV
DASNCLNGRR LSEKSTG