Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcSMS35_A0056 |
Symbol | ssb1 |
ID | 6106536 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli SMS-3-5 |
Kingdom | Bacteria |
Replicon accession | NC_010488 |
Strand | - |
Start bp | 44204 |
End bp | 44731 |
Gene Length | 528 bp |
Protein Length | 175 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 641614803 |
Product | single-stranded DNA-binding protein |
Protein accession | YP_001739944 |
Protein GI | 170650901 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0629] Single-stranded DNA-binding protein |
TIGRFAM ID | [TIGR00621] single stranded DNA-binding protein (ssb) |
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Plasmid Coverage information |
Num covering plasmid clones | 43 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 0.564154 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAGTTC GTGGCATTAA CAAGGTCATT CTTGTCGGTC GTCTGGGAAA AGATCCGGAA GTCCGTTACA TCCCAAACGG GGGCGCAGTG GCAAACCTGC AGGTGGCCAC GTCAGAAAGC TGGCGCGACA AACAGACGGG GGAGATACGG GAGCAGACAG AATGGCATCG CGTGGTGCTG TTCGGCAAGC TCGCGGAAGT GGCTGGTGAG TATCTGCGCA AGGGCGCGCA GGTCTACATC GAAGGTCAGC TTCGCACCCG TAGCTGGGAG GATAACGGTA TCACCCGTTA CGTCACCGAA ATTCTTGTTA AGACCACGGG CACCATGCAG ATGCTGGGAC GTGCCGCAGG TACTCAGACT CAGCCGGAAG AGGCGCAACA GTTCAGCGGT CAGCCTCAGC CGGAATCACA GCCGGAACCG AAAAAAGGAG GCGCGAAAAC GAAAGGCCGT GGACGTAAGG CCGCGCAGCC GGAGCCTCAG CAGCCGTCTG AACCCGCGTA TGACTTCGAT GACGACATTC CGTTCTAA
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Protein sequence | MAVRGINKVI LVGRLGKDPE VRYIPNGGAV ANLQVATSES WRDKQTGEIR EQTEWHRVVL FGKLAEVAGE YLRKGAQVYI EGQLRTRSWE DNGITRYVTE ILVKTTGTMQ MLGRAAGTQT QPEEAQQFSG QPQPESQPEP KKGGAKTKGR GRKAAQPEPQ QPSEPAYDFD DDIPF
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