| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_A0042 |
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| Symbol | traM |
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| ID | 6106492 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010488 |
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| Strand | - |
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| Start bp | 36498 |
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| End bp | 36881 |
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| Gene Length | 384 bp |
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| Protein Length | 127 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 641614789 |
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| Product | conjugal transfer protein TraM |
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| Protein accession | YP_001739930 |
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| Protein GI | 170650851 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 47 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCCAGAG TAAATCTGTA TATCAGTAAT GAGGTTCATG AAAAAATTAA CATGATTGTT
GAAAAGCGTC GTCAGGAGGG AGCAAGAGAT AAAGATATAA GCCTTTCAGG AACTGCTTCA
ATGCTTCTTG AATTGGGGCT TCGCGTATAT GATGCACAGA TGGAGCGTAA AGAGTCTGCG
TTTAACCAGA CAGAGTTTAA TAAACTTCTT CTTGAATGTG TTGTAAAAAC ACAGTCAACG
GTGGCAAAGA TTTTAGGTAT TGAGTCTCTC AGTCCTCATG TCTCCGGAAA CCCGAAGTTT
GAATATGCCA GTATGGTTGA CGATATCAGA GAGAAAGTGT CTGTTGAGAT GGACCGGTTT
TTTCCAAAAA ATGATGATGA ATAA
|
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| Protein sequence | MARVNLYISN EVHEKINMIV EKRRQEGARD KDISLSGTAS MLLELGLRVY DAQMERKESA
FNQTEFNKLL LECVVKTQST VAKILGIESL SPHVSGNPKF EYASMVDDIR EKVSVEMDRF
FPKNDDE
|
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