| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_A0041 |
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| Symbol | traJ |
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| ID | 6106483 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010488 |
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| Strand | - |
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| Start bp | 35621 |
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| End bp | 36307 |
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| Gene Length | 687 bp |
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| Protein Length | 228 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 641614788 |
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| Product | type IV secretion-like conjugative transfer system regulator TraJ |
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| Protein accession | YP_001739929 |
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| Protein GI | 170650783 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 51 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTGTGCGC TGGATCGTAG AGAAAGGCCA CTTAACAGTC AATCTGTAAA TAAATACATC
CTTAACGTTC AGAATATCTA CAGAAATTCT CCCGTTCCGG TTTGTGTCCG TAACAAAAAC
CGGAAAATCC TTTATGCCAA TGGGGCTTTT ATTGAACTCT TTTCCAGAGA AGATAAACCC
TTATCCGGAG AGAGTTATAT ACGTCTGCAG GTTGAAATTT TTCTTTCATC ACTTGAACTG
GAATGCCAGG CTCTTGGACA TGGCTCTGCA TTTTGTCGTC GTTTTAATTT TCATGGCGAA
ATCTATCAGA TAAGGATGGA GAATGTTTCT TTTTATAATG ACGAATCTGT TGTTTTATGG
CAAATTAATC CGTTTCCTGA TTATCCATTT TTTGCGTTAA ATCAGAGTGG AAGTAATACA
AATACTTCTG ACAAATTAAC GATATGGAAT GATCTTTCCC CCGGGACATT GCTTGTTTTC
TCTTTTTATA TGCTGGGTGT TGGTCATGCA ACAATTGCCA GAGAATTGGG TATTACAGAC
AGAGCATCTG AGGATCGAAT TAAACCAGTT AAACGGAAAA TAAAAGAATT TTTTGAACAC
TTTGATTTAT TCAGAGTGTC ATGTATCTAT AAAGGGGAAA TAGATTCGCT ATTAAATATA
ATTCGTGAAT TTTATAGCGT TAAGTAA
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| Protein sequence | MCALDRRERP LNSQSVNKYI LNVQNIYRNS PVPVCVRNKN RKILYANGAF IELFSREDKP
LSGESYIRLQ VEIFLSSLEL ECQALGHGSA FCRRFNFHGE IYQIRMENVS FYNDESVVLW
QINPFPDYPF FALNQSGSNT NTSDKLTIWN DLSPGTLLVF SFYMLGVGHA TIARELGITD
RASEDRIKPV KRKIKEFFEH FDLFRVSCIY KGEIDSLLNI IREFYSVK
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