| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_A0036 |
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| Symbol | traK |
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| ID | 6106500 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010488 |
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| Strand | - |
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| Start bp | 33278 |
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| End bp | 34006 |
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| Gene Length | 729 bp |
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| Protein Length | 242 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 641614783 |
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| Product | conjugal transfer protein TraK |
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| Protein accession | YP_001739924 |
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| Protein GI | 170650906 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR02756] type-F conjugative transfer system secretin TraK |
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Plasmid Coverage information |
| Num covering plasmid clones | 42 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 58 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGAAAAA ATAATACGGC AATAATATTC GGCAGCCTGT TTTTTTCCTG CAGCGTGATG
GCCGCAAACG GTACGCTGGC CCCCACCGTG GTGCCAATGG TGAACGGTGG TCAGGCCAGT
ATTGCCATCA GCAATACCAG CCCGAATCTG TTTACCGTTC CCGGTGACCG GATTATCGCC
GTGAACAGTC TGGATGGTGC CCTGACCAAT AATGAGCAGA CCGCCTCCGG CGGTGTGGTG
GTTGCCACCG TCAACAAAAA GCCCTTTACG TTCATTCTGG AAACAGAACG TGGTCTGAAT
CTTTCCATTC AGGCCGTTCC CCGTGAAGGC GCGGGGCGTA CCATTCAGCT GGTCAGTGAC
CTGCGCGGAA CCGGAGAAGA AGCCGGTGCG TGGGAAACGT CCACGCCTTA CGAATCCCTG
CTTGTGACCA TCAGCCAGGC CGTCCGTGGC GGAAAATTAC CCGCAGGCTG GTATCAGGTC
CCAGTGACAA AGGAAACCCT GCAGGCCCCG GCGGGGCTGT CTTCAGTGGC AGATGCCGTA
TGGACGGGGA ATCACCTGAA GATGGTCCGC TTTGCCGTGG AAAATAAAAC GCTGTCTGCC
CTGAATATCC GGGAAAGTGA CTTCTGGCAG CCGGGAACCC GTGCCGTGAT GTTCAGCCAG
CCTGCCAGCC AGTTACTGGC AGGTGCGCGC ATGGATGTGT ATGTCATCCG TGACGGGGAG
GGCAACTGA
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| Protein sequence | MRKNNTAIIF GSLFFSCSVM AANGTLAPTV VPMVNGGQAS IAISNTSPNL FTVPGDRIIA
VNSLDGALTN NEQTASGGVV VATVNKKPFT FILETERGLN LSIQAVPREG AGRTIQLVSD
LRGTGEEAGA WETSTPYESL LVTISQAVRG GKLPAGWYQV PVTKETLQAP AGLSSVADAV
WTGNHLKMVR FAVENKTLSA LNIRESDFWQ PGTRAVMFSQ PASQLLAGAR MDVYVIRDGE
GN
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