| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_A0035 |
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| Symbol | traB |
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| ID | 6106630 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010488 |
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| Strand | - |
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| Start bp | 31851 |
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| End bp | 33278 |
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| Gene Length | 1428 bp |
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| Protein Length | 475 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 641614782 |
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| Product | conjugal transfer pilus assembly protein TraB |
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| Protein accession | YP_001739923 |
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| Protein GI | 170650812 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 59 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCAGTA TCAATACCAT TGTGAAACGC AAGCAGTACC TGTGGCTGGG GATTGTGGTT
GTCGGTACAG CCTCCGCGAT TGGTGGGGCA CTGTATCTGT CTGATGTGGA CATGTCCGGT
AACGGTGAAA CCGTGGCTGA ACAGGAGCCT GTGCCGGATA TGACCGGTGT GGTGGATACG
ACCTTTGATG ACAAGGTGCG TCAGCATGCC ACCACCGAGA TGCAGGTGAC GGCAGCGCAG
ATGCAGAAGC AGTATGAGGA AATCCGTCGT GAGCTGGATG TTCTGAACAA ACAGCGCGGT
GATGACCAGC GTCGTATTGA AAAGCTGGGA CAGGACAATG CCGCCCTGGC AGAGCAGGTA
AAAGCCCTGG GTGCTAATCC CGTCACGGCG ACCGGTGAGC CTGTACCGCA GATGCCTGCC
TCACCGCCCG GCCCGGAAGG CGAACCACAG CCAGGAAACA CCCCCGTATC CTTCCCGCCG
CAGGGCAGCG TTGCTGTTCC ACCGCCGACG GCGTTTTATC CCGGGAATGG TGTCACGCCA
CCACCACAGG TGACGTACCA GTCTGTGCCG GTGCCTAACC GGATACAGCG TAAGGTGTTT
ACCCGTAATG AGGGAAAACA GGGACCATCA CTGCCGTACA TTCCGTCAGG AAGTTTTGCG
AAAGCCATGC TGATTGAAGG GGCGGATGCC AATGCCTCTG TCACCGGTAA TGAATCCACG
GTGCCGATGC AGCTGCGTAT CACCGGCCTG GTGGAAATGC CGAACAGCAA GACGTATGAC
GCAACGGGAT GTTTTGTGGG TCTGGAAGCC TGGGGGGATG TGTCCAGTGA GCGTGCCATT
GTACGCACCC GCAATATCAG TTGCCTGAAG GACGGCAAAA CTATTGATAT GCCGATTAAG
GGGCATGTCA GCTTCCGGGG TAAAAACGGT ATCAAGGGCG AAGTGGTGAT GCGTAACGGC
AAAATCCTCG GCTGGGCATG GGGCGCGGGA TTTGTTGACG GTATCGGTCA GGGAATGGAG
CGCGCCTCCC AGCCGGCTGT CGGGCTGGGT GCCACAGCCG CTTACGGGGC TGGTGATGTC
CTGAAAATGG GTATCGGTGG CGGCGCATCG AAAGCCGCAC AGACGCTCAG TGACTACTAC
ATCAAACGTG CCGAACAGTA TCACCCGGTG ATACCGATTG GTGCGGGCAA CGAAGTGACC
GTGGTGTTCC AGGACGGCTT CCAGCTGAAA ACCGTGGAAG AGATGGCGCT GGAACGCACG
CAGAGCAGAG CGGAAGAAGA CAATCCGGAA AGTCCGGTTC CTGTTCCGCC ATCGGCTGAA
AGTCATCTTA ACGGCTTTAA TACTGACCAG ATGCTGAAGC AGCTGGGCAA CCTGAATCCG
CAGCAGTTTA TGTCCGGCAG CCAGGGAGGG GGCAACGATG GCAAATAA
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| Protein sequence | MASINTIVKR KQYLWLGIVV VGTASAIGGA LYLSDVDMSG NGETVAEQEP VPDMTGVVDT
TFDDKVRQHA TTEMQVTAAQ MQKQYEEIRR ELDVLNKQRG DDQRRIEKLG QDNAALAEQV
KALGANPVTA TGEPVPQMPA SPPGPEGEPQ PGNTPVSFPP QGSVAVPPPT AFYPGNGVTP
PPQVTYQSVP VPNRIQRKVF TRNEGKQGPS LPYIPSGSFA KAMLIEGADA NASVTGNEST
VPMQLRITGL VEMPNSKTYD ATGCFVGLEA WGDVSSERAI VRTRNISCLK DGKTIDMPIK
GHVSFRGKNG IKGEVVMRNG KILGWAWGAG FVDGIGQGME RASQPAVGLG ATAAYGAGDV
LKMGIGGGAS KAAQTLSDYY IKRAEQYHPV IPIGAGNEVT VVFQDGFQLK TVEEMALERT
QSRAEEDNPE SPVPVPPSAE SHLNGFNTDQ MLKQLGNLNP QQFMSGSQGG GNDGK
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