Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcSMS35_A0033 |
Symbol | |
ID | 6106462 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli SMS-3-5 |
Kingdom | Bacteria |
Replicon accession | NC_010488 |
Strand | - |
Start bp | 30975 |
End bp | 31292 |
Gene Length | 318 bp |
Protein Length | 105 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 641614780 |
Product | conjugal transfer protein TrbD |
Protein accession | YP_001739921 |
Protein GI | 170650884 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 42 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 61 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACATGC GTAATATTAA TGTTATTACA GCCCTTTCTG TGCCGGGTAA AACCGTGTCA GATGATTTTA TGCATGCTGT TCTCAGTAAC TGCACCACAA GAATCGTCCT TCCTGCACCG AAGGAATTCA GTTCTGAATC ATTGCCGCAC AATTTTAATA TGGCTGCTGT CGGTGTGATG AAGGAGGGAA TGTCGATGCG TTTATTTTCT TCTCCGGGGC ATATTGTGGT TGCCGGACAA TCCGGTGGCG GAAAATCTGT TCCGGTGAAA GAACTAATCG ACAGAATTAT TCAGAAATAT AAGGAACCCA TTCGATGA
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Protein sequence | MNMRNINVIT ALSVPGKTVS DDFMHAVLSN CTTRIVLPAP KEFSSESLPH NFNMAAVGVM KEGMSMRLFS SPGHIVVAGQ SGGGKSVPVK ELIDRIIQKY KEPIR
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