Gene EcSMS35_A0033 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_A0033 
Symbol 
ID6106462 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010488 
Strand
Start bp30975 
End bp31292 
Gene Length318 bp 
Protein Length105 aa 
Translation table11 
GC content43% 
IMG OID641614780 
Productconjugal transfer protein TrbD 
Protein accessionYP_001739921 
Protein GI170650884 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones42 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones61 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACATGC GTAATATTAA TGTTATTACA GCCCTTTCTG TGCCGGGTAA AACCGTGTCA 
GATGATTTTA TGCATGCTGT TCTCAGTAAC TGCACCACAA GAATCGTCCT TCCTGCACCG
AAGGAATTCA GTTCTGAATC ATTGCCGCAC AATTTTAATA TGGCTGCTGT CGGTGTGATG
AAGGAGGGAA TGTCGATGCG TTTATTTTCT TCTCCGGGGC ATATTGTGGT TGCCGGACAA
TCCGGTGGCG GAAAATCTGT TCCGGTGAAA GAACTAATCG ACAGAATTAT TCAGAAATAT
AAGGAACCCA TTCGATGA
 
Protein sequence
MNMRNINVIT ALSVPGKTVS DDFMHAVLSN CTTRIVLPAP KEFSSESLPH NFNMAAVGVM 
KEGMSMRLFS SPGHIVVAGQ SGGGKSVPVK ELIDRIIQKY KEPIR