| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_A0031 |
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| Symbol | traV |
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| ID | 6106549 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010488 |
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| Strand | - |
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| Start bp | 30215 |
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| End bp | 30730 |
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| Gene Length | 516 bp |
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| Protein Length | 171 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 641614778 |
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| Product | conjugal transfer protein TraV |
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| Protein accession | YP_001739919 |
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| Protein GI | 170650794 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR02747] type IV conjugative transfer system lipoprotein TraV |
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Plasmid Coverage information |
| Num covering plasmid clones | 43 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 61 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGAAACAGA TTTCTTTATT TATTCCTCTG CTGGGGACCT TATTACTTTC CGGCTGTGCC
GGAACCAGTA CGGAATTTGA GTGTAACGCC ACCACATCCG ATACCTGTAT GACGATGGAG
CAGGCCAATG AGAAGGCCAA AAAACTGGAG CAGTCCTCAG AAGCAAAGCC GGTTGCGGCA
TCACTGCCGC GCCTGGCTGA AGGGAACTTC CGGACAATGC CGGTGCAGAC CGTCACCGCG
ACCACTCCGT CCGGCAGCAG ACCTGCGGTG ACAGCACATC CGGAGCAGAA ACTGCTGGCA
CCTCGCCCGC TGTTTACCGC TGCCCGGGAA GTGAAAACGG TTGTTCCGGT CAGTTCAGTT
ACGCCGGTAA CACCTCCTCG TCCGCTAAGA ACGGGTGAGC AGACGGCAGC ATTATGGATA
GCGCCTTATA TTGATAACCA GGATGTTTAT CATCAGCCAT CCAGCGTGTT TTTTGTTATT
AAACCGTCTG CGTGGGGAAA ACCACGTATT AATTAA
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| Protein sequence | MKQISLFIPL LGTLLLSGCA GTSTEFECNA TTSDTCMTME QANEKAKKLE QSSEAKPVAA
SLPRLAEGNF RTMPVQTVTA TTPSGSRPAV TAHPEQKLLA PRPLFTAARE VKTVVPVSSV
TPVTPPRPLR TGEQTAALWI APYIDNQDVY HQPSSVFFVI KPSAWGKPRI N
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