| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_A0026 |
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| Symbol | traU |
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| ID | 6106486 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010488 |
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| Strand | - |
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| Start bp | 25071 |
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| End bp | 26063 |
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| Gene Length | 993 bp |
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| Protein Length | 330 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 641614773 |
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| Product | conjugal transfer pilus assembly protein TraU |
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| Protein accession | YP_001739914 |
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| Protein GI | 170650911 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 40 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 64 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCGAA GCCTGTGGCT GCTGATGTTA TTCCTTCTCG CCGGTCATGT CCCTGCAGCG
TCTGCGGATT CTGCCTGTGA GGGGCGTTTT GTAAACCCGA TCACGGATAT CTGCTGGAGC
TGTATTTTCC CGCTCTCGCT GGGCAGTATC AAAGTCAGTC AGGGTAAGGT CCCCGACACG
GCGAACCCGT CGATGCCCAT TCAGATTTGT CCGGCACCGC CGCCGCTGTT CAGGCGTATC
GGGCTGGCCA TTGGTTACTG GGAGCCGATG GCGCTGACGG ACGTCACCCG ATCACCGGGA
TGCATGGTTA ACCTGGGCTT CAGCCTGCCG GCTTTTGGTA AAACGGCACA GGGAACGGCG
AAAAAGGATG AGAAGCAGGT GAACGGGGCG TTCTATCACG TTCACTGGTA CAAATACCCG
CTGACGTACT GGCTTAACAT CATCACATCG CTGGGCTGTC TGGAAGGTGG TGACCTGGAT
ATCGCTTATC TTTCTGAAAT CGACCCCACC TGGACGGACA GCAGCCTGAC CACCATTCTC
AATCCGGAAG CTGTCATCTT TGCCAATCCG ATAGCACAGG GGGCCTGTGC AGCAGATGCC
ATTGCCAGCG CCTTTAATAT GCCTCTCGAT GTTCTGTTCT GGTGTGCCGG TTCGCAGGGC
AGTATGTACC CGTTCAATGG CTGGGTGAGT AATGAGTCCA GTCCGTTGCA GTCCTCCCTG
CTGGTCAGTG AACGCATGGC GTTCAAGCTG CACCGTCAGG GCATGATTAT GGAAACCATC
GGGAAAAATA ACGCCGTCTG TAATGAATAT CCGTCCCCAA TCCTGCCCAA AGAACGCTGG
CGTTACCAGA TGGTGAATAT GTACCCGGAC AGCGGACAGT GCCATCCGTT CGGGCGCAGT
GTGACCCGCT GGGAAACCGG GAAAAATCCG CCCAATACAA AGAAAAACTT CGGCTACCTG
ATGTGGCGTA AACGTAACTG TGTCTTCCTG TAA
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| Protein sequence | MKRSLWLLML FLLAGHVPAA SADSACEGRF VNPITDICWS CIFPLSLGSI KVSQGKVPDT
ANPSMPIQIC PAPPPLFRRI GLAIGYWEPM ALTDVTRSPG CMVNLGFSLP AFGKTAQGTA
KKDEKQVNGA FYHVHWYKYP LTYWLNIITS LGCLEGGDLD IAYLSEIDPT WTDSSLTTIL
NPEAVIFANP IAQGACAADA IASAFNMPLD VLFWCAGSQG SMYPFNGWVS NESSPLQSSL
LVSERMAFKL HRQGMIMETI GKNNAVCNEY PSPILPKERW RYQMVNMYPD SGQCHPFGRS
VTRWETGKNP PNTKKNFGYL MWRKRNCVFL
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