| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_A0023 |
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| Symbol | trbC |
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| ID | 6106494 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010488 |
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| Strand | - |
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| Start bp | 23436 |
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| End bp | 24074 |
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| Gene Length | 639 bp |
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| Protein Length | 212 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 641614770 |
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| Product | conjugal transfer pilus assembly protein TrbC |
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| Protein accession | YP_001739911 |
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| Protein GI | 170650809 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR02742] type-F conjugative transfer system pilin assembly protein TrbC |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 66 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAACTGGA AAACATTTGC GCTTTTTGCC CTGACTGCAG GAATGCATAT CACTGTTCAT
GCCTCAGACA ATGTGAACAC TCCTGAAAAC CGCCAGTTCC TGAAGCAGCA GGAAAATTTA
AGCAGACAAC TGCGTGAAAA ACCTGACCAT CAGCTGAAGG CCTGGGCGGA GAAACAGGTG
CTGGAGAACC CCCTTCAGCG TTCAGATAAC CATTTCCTGG ATGAGCTGGT TCGTAAACAG
CAGGCTTCGC AGGACGGGAA ACCCCGGCAG GGGGCCCTGT ATTTTGTGTC GTTTTCCATT
CCCGAAGAGG GGCTGAAACG GATGCTGGGC GAAACCCGGC ACTACGGTAT ACCCGCCACA
CTGCGGGGCA TGGTGAACAA TGACCTGAAG ACCACCGCTG AAGCCGTGCT GTCCCTGGTG
AAAGACGGCG CGACTGATGG TGTTCAGATC GACCCGACGC TGTTTTCACA GTACGGCATT
CGCAGTGTAC CGGCACTGGT GGTGTTCTGT AGTCAGGGAT ACGACATCAT CCGGGGAAAC
CTGCGGGTCG GCCAGGCGCT GGAGAAAGTG GCCGCCACGG GTGACTGCCG GCAGGTGGCT
CATGATTTAC TGGCAGGGAA AGGAGATTCC GGGAAATGA
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| Protein sequence | MNWKTFALFA LTAGMHITVH ASDNVNTPEN RQFLKQQENL SRQLREKPDH QLKAWAEKQV
LENPLQRSDN HFLDELVRKQ QASQDGKPRQ GALYFVSFSI PEEGLKRMLG ETRHYGIPAT
LRGMVNNDLK TTAEAVLSLV KDGATDGVQI DPTLFSQYGI RSVPALVVFC SQGYDIIRGN
LRVGQALEKV AATGDCRQVA HDLLAGKGDS GK
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