| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_A0022 |
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| Symbol | traN |
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| ID | 6106499 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010488 |
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| Strand | - |
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| Start bp | 21631 |
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| End bp | 23439 |
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| Gene Length | 1809 bp |
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| Protein Length | 602 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 641614769 |
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| Product | conjugal transfer mating pair stabilization protein TraN |
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| Protein accession | YP_001739910 |
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| Protein GI | 170650771 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR02750] type-F conjugative transfer system mating-pair stabilization protein TraN |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 62 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACGTA TTTTACCTCT GATACTGGCT CTGGTTGCCG GCATGGCACT GGCTGACAGC
AACAGTGATT ACCGGGCCGG CTCTGATTTT GCTCACCAGA TCAAAGGACA GGGAAGCAGC
AGTATTCAGG GCTTTAAGCC ACAGGAGAGT ATCCCCGGCT ATAACGCGAA TCCGGACGAG
ACAAAATACT ACGGTGGCGT GACTGCCGGC GGGGATGGCG GCCTGAAAAA TGACGGCACC
ACGGAATGGG CGACCGGTGA AACCGGAAAA ACCATCACAG AGTCATTCAT GAACAAGCCG
AAAGACATTC TTTCACCGGA TGCACCGTTT ATCCAGACCG GCAGGGATGT GGTGAACCGG
GCTGACAGCA TTGTGGGAAA CACCGGGCAG CAGTGCAGTG CGCAGGAGAT TAGCCGGAGT
GAATACACGA ATTACACCTG TGAGCGGGAT TTACAGGTGG AGCAGTACTG CACACGAACT
GCCCGTATGG AGCTGCAGGG GAGTACCACA TGGGAAACCC GGACGCTGGA GTATGAAATG
AGTCAGCTAC CTGCACGTGA AGTGAATGGT CAGTATGTTG TCTCCATTAC CTCTCCCGTT
ACCGGTGAAA TTGTCGATGC GCATTACAGC TGGAGTCGTA CTTACCTGCA GAAGAGTGTA
CCTATGACAA TTACAGTACT GGGAACCCCA CTGAGCTGGA ATGCCAAATA CTCAGCAGAT
GCCTCATTTA CACCAGTACA GAAAACACTG ACTGCCGGTG TTGCTTTTAC GTCATCTCAC
CCCGTCCGGG TCGGGAATAC AAAATTCAGA CGTCATACGG CAATGAAGCT GCGTCTGGTT
GTCAGGGTAA AAAAAGCCTC GTACACCCCG TATGTTGTCT GGTCTGAAAG CTGCCCGTTC
AGCAAGGAGC TGGGGAAACT GACAAAAACA GAATGTACGG AGGCTGGCGG GAACAGGACG
CTGGTGAAAG ACGGTCAGTC ATACAGCATG TACCAGAGCT GCTGGGCATA CCGGGACACG
TATGTCACAC AGTCAGCAGA CAAGGGAACC TGTCAGACCT ACACCGACAA TCCTGCCTGT
ACCCTGGTGT CACACCAGTG CGCCTTTTAC TCCGAAGAAG GTGCCTGTCT GCATGAATAT
GCCACGTACT CCTGTGAGTC AAAAACATCC GGGAAAGTGA TGGTCTGTGG GGGAGACGTC
TTCTGTCTCG ATGGCGAATG CGATAAGGCT CAGAGCGGGA AGAGTAATGA TTTTGCCGAA
GCCGTTTCTC AGCTGGCGGC ACTGGCCGCA GCAGGTAAGG ATGTTGCGGC GCTGAACGGG
GTGGATGTCC GTGCTTTCAC CGGTCAGGCG AAATTTTGTA AGAAGGCTGC AGCCGGATAC
AGCAACTGCT GTAAGGACAG CGGCTGGGGA CAGGATATCG GGCTGGCCAA ATGCAGCAGT
GATGAAAAAG CCCTGGCTAA AGCAAAATCA AACAAACTGA CCGTCAGTGT CGGAGAGTTC
TGTTCGAAGA AAGTGCTGGG TGTCTGCCTG GAGAAAAAAC GCAGTTACTG TCAGTTTGAT
TCGAAGCTGG CGCAGATAGT CCAGCAGCAG GGGCGCAACG GACAGCTGCG TATCAGTTTT
GGCAGTGCGA AGCATCCTGA CTGTCGGGGG ATTACGGTTG ATGAGCTGCA GAAAATTCAG
TTCGACAGAC TGGATTTCAC TAACTTCTAC GAAGACCTGA TGAATAACCA GAAAATCCCG
GACAGTGGTG TTCTGACGCA GAAAGTGAAA GAGCAGATTG CTGACCAGCT GAAACAGGCA
GGACAGTAA
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| Protein sequence | MKRILPLILA LVAGMALADS NSDYRAGSDF AHQIKGQGSS SIQGFKPQES IPGYNANPDE
TKYYGGVTAG GDGGLKNDGT TEWATGETGK TITESFMNKP KDILSPDAPF IQTGRDVVNR
ADSIVGNTGQ QCSAQEISRS EYTNYTCERD LQVEQYCTRT ARMELQGSTT WETRTLEYEM
SQLPAREVNG QYVVSITSPV TGEIVDAHYS WSRTYLQKSV PMTITVLGTP LSWNAKYSAD
ASFTPVQKTL TAGVAFTSSH PVRVGNTKFR RHTAMKLRLV VRVKKASYTP YVVWSESCPF
SKELGKLTKT ECTEAGGNRT LVKDGQSYSM YQSCWAYRDT YVTQSADKGT CQTYTDNPAC
TLVSHQCAFY SEEGACLHEY ATYSCESKTS GKVMVCGGDV FCLDGECDKA QSGKSNDFAE
AVSQLAALAA AGKDVAALNG VDVRAFTGQA KFCKKAAAGY SNCCKDSGWG QDIGLAKCSS
DEKALAKAKS NKLTVSVGEF CSKKVLGVCL EKKRSYCQFD SKLAQIVQQQ GRNGQLRISF
GSAKHPDCRG ITVDELQKIQ FDRLDFTNFY EDLMNNQKIP DSGVLTQKVK EQIADQLKQA
GQ
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